KEGG   Candidatus Paraluminiphilus aquimaris: E0F26_04905
Entry
E0F26_04905       CDS       T09832                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
paqm  Candidatus Paraluminiphilus aquimaris
Pathway
paqm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paqm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E0F26_04905 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paqm03400]
    E0F26_04905 (uvrA)
DNA repair and recombination proteins [BR:paqm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E0F26_04905 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E0F26_04905 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 nSTAND1 AAA_16 AAA_23 RsgA_GTPase DnaJ_CXXCXGXG AAA_21 nSTAND3 AAA_25 Viral_helicase1 BCA_ABC_TP_C XRRA1_C
Other DBs
NCBI-ProteinID: UZP74119
UniProt: A0ABY6Q4B2
LinkDB
Position
complement(1044245..1047067)
AA seq 940 aa
MDTIQVRGARTHNLKNIDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDIDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGDPRC
PTHGISLKAQTVTQMVDTVMAMPTGERLMLLAPLVRDRKGEHLHVFEQARAAGFIRVRVD
GIVCDLDDVPTLDKKKKHRIDVVVDRFKVREDLALRLAESFETALELTDGLASVAPMDGE
GKETLFSARYSCPQCGHSIDELEPKLFSFNNPAGACESCDGLGVTQFFDEARVVAHPEAS
LAAGAIRGWDRRNVYYFHLLTSLAKHYGFDIDQPYEALAPEHRDILLHGSRGEELEFAYI
NDRGSVFKRRHAFEGILPNMERRYRDTESSGVREELSKYVSTASCKACHGTRLCADARSV
FVDERTLPSITELPVGEAYAYFEALEMEGRQGEIADKILKELRARYQFLVDVGLNYLTLN
RSAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLRTLTHLRDIGNTV
LVVEHDEDAIRAADHVIDIGPGAGVHGGKVVAQGPMQSIMDTKDSLTGDYLSGRREITVP
KKRRTADKTKELVIEGATGNNLRDVTLSLPVGLLTCVTGVSGSGKSTLINGTLYPLAATE
LNGATTLRAAPHDECKGLEQFDKCIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGTQEA
RSRGYKPGRFSFNVRGGRCEACQGDGVTKVEMHFLPDIYVPCDVCKGKRYNRETLEIKYK
GRNIAEVLDMTIEDALEFFEPVPSIHRKLQTLMDVGLSYVRLGQAATTLSGGEAQRVKLS
RELSKRDTGSTLYILDEPTTGLHFEDIRQLLDVLHRLRDGGNTVVIIEHNLDVIKTADWI
VDLGPEGGSGGGEIIATGTPEDVAKNKKSHTGRFLLPLLS
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggacaccattcaggttcgcggcgcgcgtacccacaatctcaaaaacatcgacctcgat
ataccccgcgataaattggtagtgattacagggctctcaggttcaggtaaatcgtccttg
gcattcgacaccctgtatgcagagggccagcgccgttacgtcgagtcattatcgacgtac
gctcggcagttcctttcgatgatggagaagcctgatattgatcatatcgaaggtttgtca
cccgccatttcgatcgaacaaaaatcaacctcccataacccgcgctcaacggtgggtacc
attaccgaaatttatgactatctgcgcctgctctttgcccgcgttggagacccccgatgc
ccaacacacggcatttcgctcaaagcgcaaacggtcactcaaatggtcgacaccgttatg
gcaatgccgaccggtgagcgacttatgttactagcaccgttagtgcgtgataggaaaggt
gagcacttacatgtcttcgaacaggccagagcagcgggcttcatcagggtccgtgttgac
ggaatagtttgtgaccttgacgatgtccccactctcgacaagaagaagaagcaccggatt
gatgttgtcgttgaccgctttaaagtaagagaggatctcgcgcttcgcctagcagaatcc
tttgagaccgcgcttgaactcaccgacggtctcgcaagcgtcgccccaatggacggcgaa
ggaaaagagacgcttttttcagcacgctattcctgtcctcagtgtggacactccatcgat
gagttagaacccaagcttttctcgttcaacaaccccgcaggcgcctgtgaaagttgcgac
ggcttgggcgtgacccaattttttgacgaggcgcgtgtggtcgcccaccccgaagcgagc
ctcgcagcgggcgcaatccgcggttgggatcgccgcaacgtatactactttcatctcttg
acctcgctcgctaagcattacggttttgatattgatcaaccttatgaggcgctagcaccc
gagcaccgagatattctcctgcacggcagtcggggtgaggaactcgagttcgcgtacatc
aatgatcgtggctccgtgttcaaacgccggcacgcattcgagggcattcttcctaatatg
gagcgccgctaccgtgacactgaatcctcaggtgtccgagaggagctttcgaaatacgtt
tcaaccgcctcatgcaaggcgtgccacggcacccgtttgtgtgccgatgcacgcagtgtc
ttcgtggacgagagaacattacctagcattactgagttacccgtgggtgaggcatacgct
tatttcgaggcgctcgaaatggaaggccggcaaggcgagatcgccgataaaatcctaaag
gaactccgcgctcgctatcagtttttggttgatgtgggtctcaattatctaacgctcaac
cggagcgcagaaaccctctcaggaggagaggcccagcgtattcgcctcgcgtcccaaata
ggcgcaggcttggtgggcgttatgtatattctcgacgagccatctatcggtctacaccag
cgcgacaacgaacgtttgctgcgaacactgacgcaccttcgggatataggcaacacggtc
ttagtcgtagagcacgatgaagacgccattcgcgctgccgaccatgtcattgatattggt
cccggtgcgggcgtccatggcggtaaggtcgttgcccaaggccctatgcaatcgatcatg
gataccaaggactcactgaccggtgactacctctcggggcgacgcgaaatcaccgtgcca
aagaaacgtcgaacagctgataaaacaaaagagctggtaatcgagggcgcaacgggaaat
aacctccgcgatgtcacgcttagcctacccgtggggctacttacctgcgtcacaggtgta
tcgggttctggaaagtcgaccttgatcaacggcacgctgtatccgcttgcggcaacagag
ctcaacggcgccacaaccttgcgagcagcgcctcacgacgagtgcaagggacttgagcaa
ttcgataagtgtattgatatagaccagtcgccgattggccggacacctcggtcaaaccca
gcgacctacacaggcattttcacccccgtacgagagctgtttgcgggcacacaggaagcg
cgttcgcgtggctataagcccggccgatttagcttcaatgtgagaggaggacgctgcgag
gcctgccaaggtgatggggtgaccaaagtggaaatgcacttcttgcctgatatctacgtt
ccctgcgatgtctgcaaagggaagcgctacaaccgtgaaacgctcgagattaagtacaaa
gggcgaaacatcgctgaagtgctcgatatgaccattgaagacgcactcgaattcttcgag
cccgtaccgtcgattcatcgaaagcttcagacgcttatggacgtcggtcttagctatgta
cgactcggacaagcggcaaccacgctctccggcggcgaggcgcaacgtgtcaagctgtca
cgcgagctgtcaaagcgcgatacgggcagtaccctctacattttagatgaacccaccacg
ggactgcactttgaggacataagacagctcctcgacgtgttgcatcgcctgagagacggc
ggcaataccgtggtaatcatcgagcacaatcttgatgtcattaagaccgcagactggatt
gttgacctcggcccagagggtggatcaggtggtggcgaaattattgcgacgggaacacca
gaagatgtcgcaaaaaacaaaaagtcacacacggggcgattcctcttaccactactgagc
taa

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