Candidatus Paraluminiphilus aquimaris: E0F26_06255
Help
Entry
E0F26_06255 CDS
T09832
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paqm03009
]
E0F26_06255 (rimO)
Enzymes [BR:
paqm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E0F26_06255 (rimO)
Ribosome biogenesis [BR:
paqm03009
]
Prokaryotic type
ribosomal protein modification factors
E0F26_06255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
CLP1_P
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
UZP74366
LinkDB
All DBs
Position
complement(1361810..1363129)
Genome browser
AA seq
439 aa
AA seq
DB search
MPQAQKVGFVSLGCPKALVDSERILTQLRFDGYEVSPSYDDAGVVIVNTCGFIDSAKEES
LAAIGEALEENGRVLVTGCMGGGEQADLVLQRHPKVLGITGPAAYEEVLSEVRRVLPNAH
VPDPKIDLIPAQGVKLTPKHYAYLKISEGCNHRCRFCIIPSLRGDLVSRPIGDVMREAEQ
LARSGVKELLVISQDTSAYGVDIKYKTDFWGGRPLKSDLYHLASALGELGIWVRMHYVYP
YPHVDKIIPLMAEGKVLPYLDIPLQHGSPSVLKRMKRPAASEKTLDRIRSWREICPDITL
RSTFIVGFPGETEGEFNELLDFMRDASLDRVGCFKYSAVEGASANELDNPVPEDIKEERW
HRFMAVQQEISAQRLQRKVGSEVDVIVDEVSGEAAVGRTKGDAPEIDGVVYLKNTDGLAP
GDVIRRRVTKADDYDLWTD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcgcaaaaagtaggtttcgtgtcacttgggtgcccaaaagccctcgtggat
tcggagcgcatcctcacacaactaagattcgatggatacgaggtgtcgccttcttacgat
gatgccggtgttgtcattgtgaacacctgcggcttcatcgacagcgcgaaggaagagtcg
ctagctgccatcggtgaggcgcttgaggaaaacggtcgagttctggtaacgggctgtatg
ggagggggtgaacaggccgatctcgttttacagcgccatcccaaagtactgggaatcacc
ggacctgctgcctacgaggaagtcctatctgaggttcgtcgcgtcctccccaacgctcac
gtacccgacccgaagatcgatcttattccggcacagggtgtaaagcttacgccaaagcac
tatgcctatctgaagatctcggagggatgcaatcatcgctgtcgattttgcattatccca
agtcttcgaggcgaccttgtcagccgacccattggcgatgtgatgcgtgaagccgaacag
ctcgctcgctcaggtgttaaagagttgctcgtcatctctcaagacaccagcgcttatggg
gtcgatattaaatacaaaacggacttctggggtggacgcccgctcaaaagtgatctgtat
catctcgcttctgcactcggcgaattgggtatctgggtgcgaatgcactacgtctaccct
tatccgcacgtcgacaaaatcatcccgcttatggcggaggggaaagtgctcccctatctc
gacataccgttgcaacacggcagtccaagtgtcctaaagcgaatgaagcgaccggctgca
tctgaaaaaaccctcgatcgtattcgttcttggcgagagatctgtccagacatcacattg
cgctcaacctttatcgttggctttcccggtgaaaccgagggtgaattcaatgagttactc
gactttatgcgtgacgcgtcactcgatcgtgtcgggtgtttcaagtactcagcagtcgaa
ggtgcctcggcaaacgagctcgacaacccggtccccgaggacattaaagaggaacgctgg
caccgttttatggctgtgcagcaagaaatcagtgctcaacgcctccagcgtaaagttggc
tccgaggtggatgtcatcgtcgacgaggtatccggtgaggcggccgtggggcgaaccaaa
ggcgacgcacccgaaatagatggggtggtatacctaaaaaacaccgacgggttggcgccg
ggagatgtgatacgtagacgggtgaccaaggcagacgattatgatctgtggaccgactaa
DBGET
integrated database retrieval system
