Candidatus Paraluminiphilus aquimaris: E0F26_06335
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Entry
E0F26_06335 CDS
T09832
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqm03032
]
E0F26_06335 (gyrA)
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_06335 (gyrA)
Enzymes [BR:
paqm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E0F26_06335 (gyrA)
DNA replication proteins [BR:
paqm03032
]
Prokaryotic type
DNA Topoisomerases
E0F26_06335 (gyrA)
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E0F26_06335 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UZP74380
UniProt:
A0ABY6Q662
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All DBs
Position
1375213..1377828
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AA seq
871 aa
AA seq
DB search
MSDQQQDLAQEVHPINIEDELKQSYMDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELN
NDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQTFSLRYPLVDGQGNFGSIDGDS
AAAMRYTEIRMTKLAHSLLADLEKETVDFAENYDGTEHIPVVLPTRAPNLLINGSAGIAV
GMATNIPPHNMREVVAGCLALLENPELTIDDLIRYIPGPDFPTGAIITGRAGIIQAYRTG
RGRIYVRAKAEVITDESKGKDTIIIHEIPYQLNKARLLERIAELVKEKKIEGITELRDES
DKDGLRVVIELRRGEVGDVVLNNLYAQTQLQSVVGINMVALVDGQPKVLNLKEIIEAFIR
HRREVVTRRTLFLLRKARERGHVLEGLAVALANIDEIIELIKTSPTAADARERLVAAAWA
PGDVSAMLERAGESACRPEDLDGDFGLIDGKYHLSPAQAQAILDLRLNRLTGLEHEKLLQ
EYADKVAEIADLLEILGDPDRLRSVIREELEEIVTDFGDERLTEITDSAHDLTVEDLITE
EDRVVTISHLGYAKTQSLTDYQAQRRGGTGRSATAVKDEDFVEHLLIASTHATVLCFSNL
GKVYWLKVFHIPLASRNSRGRPMVNLLALDEDERITSILPIDGYSEDQFVFMATANGTVK
KTAATQFARQRSVGLRAIELDEDDVLIGTAITEGNSDIMLFSSEGKATRFNESQVRAMGR
TARGVRGINLAKGHKLISLIVPQEGGRILTVTENGYGKRTENAEFPAKGRGGKGVIAMST
SERNGSLVGAVQVWDADEMMLISNQGTAVRTRVDEVSLLGRNTQGVRVIRTRDGEALVSV
SRIVEDDDAAEPAQPVVAEGAADDDNTESQE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcagcagcaagacttagcgcaagaagtacaccctatcaatatcgaggacgag
ctcaagcaatcctacatggattatgcgatgagcgtcatcgtcggacgtgcattgcccgat
gttcgggacgggctaaagcccgtgcaccggcgcgtgctctttgccatgaacgagctcaac
aacgactggaacaaagcctataagaaatcggcacgtgtcgtgggtgacgttatcggtaaa
tatcaccctcatggtgactccgcggtctacgacaccatcgtgcgtatggcgcagacgttt
tcgttgcgctacccactggtagacgggcaaggcaatttcggctcgatagatggcgattcg
gcggcggcgatgcgttacaccgaaattcgcatgaccaagctggcgcactcgctactggcc
gacctcgagaaggaaacggttgattttgcggaaaactacgacgggaccgaacatatcccc
gtggttctccccacgcgagcccccaacctgctcattaacgggtcggcaggtattgctgtg
ggaatggcgaccaacattccaccgcataacatgcgagaagtggttgcagggtgtctggcg
ctccttgagaacccagagctcaccattgatgacctcattcgttacattcccggccctgat
tttccaacgggcgccatcatcaccggacgcgccggcattattcaggcctaccgaacgggg
cggggtcgaatttacgtcagagctaaagcggaagtcatcaccgatgagtcaaaaggcaaa
gacacaattatcatccatgagattccttatcagttaaacaaggcgcgcttattggagcgt
attgccgagctggtgaaagagaaaaagatcgagggaattaccgagcttcgcgatgagtcc
gacaaggacggcttgcgcgtggtgattgagcttcgtcgtggcgaggtcggtgatgttgtg
ctcaataacttgtacgcgcagacacagcttcagtcggtggtgggcatcaatatggtcgcc
ttggttgacggccagccgaaggtgcttaacctcaaagaaatcattgaggcctttatacgc
caccgccgagaggtcgtaacgcgccggacactgttcctgttgcgaaaagcgcgcgagcgg
ggtcatgtcttagaaggtttggcggttgcgctagccaatatcgacgagattatcgagctt
attaaaacgtcccctacggcggcggatgcacgtgagcgcctcgtggcggctgcgtgggcg
ccaggtgatgtcagcgcgatgctcgagcgcgcgggcgagtctgcttgtcgcccagaggac
cttgacggcgactttggtctaattgacggcaagtatcatctttctccggcacaggctcag
gcaatcttagatttacgcctcaaccgtcttaccggtcttgagcacgagaagctgcttcag
gaatacgccgataaggtcgctgagatcgccgatttacttgagatattgggcgatccagat
cgactgcgctcggtcattcgcgaggagctcgaggaaatcgttacggattttggtgatgaa
cgtctcacggaaattaccgattcagcgcacgacttaacggttgaagacctcattacagag
gaagatcgggtcgtcacgatttcgcatttgggttacgcgaaaacgcagtcattgaccgac
tatcaagcacagcgacgcggcggtaccggacgaagcgcgacggcggtgaaagatgaggac
tttgttgagcatttattgatcgcaagcacgcacgcgaccgtcttatgtttctccaatctg
ggtaaagtctactggctgaaggtattccatattccgctggcgagtcgtaactcgcgagga
cggccaatggttaatttgctcgccttggatgaagacgagcgtattacatccatcctgccg
atcgatggttacagtgaagatcagtttgtctttatggctacggcaaacggtacggttaaa
aagacggctgccacgcagtttgcacgtcagcgcagtgtcggcttgagggccattgagctc
gatgaggatgatgtactcatcggtacggcaattactgagggcaatagcgacattatgctg
ttctcaagtgagggcaaagcgacgcgatttaacgagagccaagtccgtgcgatgggaaga
acagctcgcggggtgcgaggcatcaatctggcgaaaggccataagctgatttcgctcatc
gtcccccaagagggtggccgcatattgacggtgaccgagaacggatacggtaagcgcaca
gaaaacgcggaattcccagcgaaagggcggggcggtaagggtgtcatcgctatgtcgacg
tcagagcgaaatggatcgctcgttggtgccgttcaggtttgggatgccgacgaaatgatg
ttgatctctaaccagggcacggcggttcgaacgcgagtcgatgaggtcagtttgctaggc
cgaaatacgcagggtgtgcgggtcattcgcacacgtgatggagaagcgttggtcagtgta
agtcgtatcgtcgaagacgatgatgcggcagagcctgcccagccagtagtggctgagggc
gctgcggacgacgataacaccgagtcccaagagtga
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