Candidatus Paraluminiphilus aquimaris: E0F26_09040
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Entry
E0F26_09040 CDS
T09832
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqm03032
]
E0F26_09040
03036 Chromosome and associated proteins [BR:
paqm03036
]
E0F26_09040
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_09040
DNA replication proteins [BR:
paqm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E0F26_09040
Chromosome and associated proteins [BR:
paqm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E0F26_09040
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E0F26_09040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
UZP74873
LinkDB
All DBs
Position
complement(1980591..1980866)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELIDAMASEADLPKAAAGRALDAAVAAITAELAKGGSVSLVGFGTFSVKPRAARDG
RNPRTGETIKIAASNTPGFKAGKALKDACNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaatgaattaattgatgctatggcatccgaagcagatctccctaaagccgcc
gccggtcgtgccctcgatgcagcagtagcagccattactgctgaacttgctaaaggtggt
agtgtatcgcttgtcggtttcggtacgttttcagtcaagccacgcgcagctcgtgatggt
cgtaacccacgaactggcgaaactattaagattgcggcgtctaacacgcctggcttcaaa
gctggcaaagcacttaaagacgcgtgcaattcgtaa
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