Candidatus Paraluminiphilus aquimaris: E0F26_11285
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Entry
E0F26_11285 CDS
T09832
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E0F26_11285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_11285
Enzymes [BR:
paqm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E0F26_11285
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E0F26_11285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
LAGLIDADG_4
FlgK_D1
DUF6447
Motif
Other DBs
NCBI-ProteinID:
UZP75280
UniProt:
A0ABY6Q8N4
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All DBs
Position
2473301..2474653
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AA seq
450 aa
AA seq
DB search
MPLPKPTPVSVSELNRKAKSLLENQLGEVCVEAEIGNLSRPSSGHWYFSLKDDRAQLSCA
MFRRANMRVRFEPKVGDSVIVRGLLSIYEARGDYQLIVDHMEASGDGALQRALEALKQKL
QTEGLFAEERKKAIPVHCERVGVVTSPTGAAVEDIISVLGRRSPSSHIAIYPVQVQGVGS
AEQIAAAIDVANAQVRNGERELDVLIVGRGGGSLEDLWAFNEESVARAIARSEIPVVSAV
GHEIDYSISDLVADMRAATPSQAAELITRDSQEWLQRIDIATAQLETMTQRILRDHRHRT
EGLVARLRHPSQQLTLLKNKISANQNQATALIQRRLAGTKHPLAQLNTRLQAASPSTLLH
QRRELVTNLSSGLPHQIDTIMRGHRQRISHLTTLLETLGPTSTLKRGYAIITDKTGSVIR
STTQTTLGERLDITLDDGQVGVTVDEVNLR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccactacccaaacccacgcccgtcagtgttagtgaactaaaccgtaaagcaaagtcg
ttgcttgagaaccaactgggcgaagtttgcgtcgaggcggagatcggcaacttatcaaga
cctagctcaggacactggtatttcagcctcaaagacgaccgagctcaacttagttgtgcg
atgttcagacgcgcaaacatgcgcgtgaggtttgagccgaaggtaggggactccgttatc
gttcgaggcctgctttccatctacgaggctcgcggcgactatcaactgattgtcgatcac
atggaggcgtcgggtgatggtgcgttgcagcgcgcactggaggccctaaaacaaaaactt
cagacagaggggcttttcgccgaagagcgtaaaaaggccatccccgtacattgcgaacgc
gtcggtgtcgtaacgtctcccactggtgcagccgtcgaggacattattagcgtacttgga
cgaagatcgccgtctagccatatcgctatttatcccgtgcaggttcaaggtgttgggtcc
gcggagcagattgccgccgctatcgatgtcgcaaatgcccaagtacgcaatggggagcga
gagcttgatgtgctcatcgtcggacgtgggggcggatcactcgaggatctatgggcattc
aatgaagagagtgtggcgcgggccatcgctcgctcggaaatacctgtcgtctcagcggtt
ggccatgagatcgattacagcatctccgatctcgtagcggatatgagagccgccacaccc
tcgcaagcagctgaactgataacgcgcgacagccaagagtggcttcaacgaatcgatatt
gcgacggcgcagctagagaccatgactcagcggatactgagagatcatcgacatcgcacc
gaaggtttggtcgcacgattacggcacccgagccaacagcttacgttgctgaaaaacaaa
ataagtgccaaccaaaatcaggcaaccgcacttattcaaaggaggctcgccggaaccaaa
catccgcttgcgcagctcaacacacgcctccaagcagcctcccccagcaccctactccac
caacgccgggagctcgtgactaacttgtctagcggattaccccatcaaatcgacaccata
atgagaggacataggcagcgtatcagtcacctaacgacgctactcgaaacactaggaccc
acgtcaacactcaagcggggctacgcgatcatcacagacaaaacaggaagtgttatacgc
tctacaacgcagaccacactcggtgagcgccttgatatcacgcttgacgacgggcaggtg
ggtgtaacggttgacgaggttaaccttcgttaa
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