KEGG   Candidatus Paraluminiphilus aquimaris: E0F26_12275
Entry
E0F26_12275       CDS       T09832                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
paqm  Candidatus Paraluminiphilus aquimaris
Pathway
paqm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paqm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E0F26_12275 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paqm03019]
    E0F26_12275 (rhlB)
Enzymes [BR:paqm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     E0F26_12275 (rhlB)
Messenger RNA biogenesis [BR:paqm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     E0F26_12275 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Utp25_C UvrA_inter
Other DBs
NCBI-ProteinID: UZP75467
UniProt: A0ABY6Q849
LinkDB
Position
complement(2672714..2673928)
AA seq 404 aa
MQLSENTAQTPENAASTAEDILFESLDLDGSLMRGIDALGFEKCSPIQAKILPYTLEGHD
AIGKAQTGTGKTAAFLITLFNDLLNNPIEGERYLAEPRAVVLAPTRELVMQIGDDARELG
KFTGLSTVTLIGGADYAKQLAKVNDRVTDIVVATPGRLIDFIQRGDMFLDRVESLVLDEA
DRMLDMGFIPQVKRIVRSTPRKEDRQTLLFSATFSPDIMNLARQWTFDPITVEIEPERVA
TENVEQRVYLLESRDRLNVLKRILAEPDATSVIVFANRRDQVRRVYERLNKQGLECGILS
GEVAQVKRTKTLERFKSGRIRVLIATDVAGRGIHVDGVSHVINYDLPEDPEDYVHRIGRT
GRAGEKGISISFASEDDAFLLPEIEALLGEPLKCSQVPEELLAD
NT seq 1215 nt   +upstreamnt  +downstreamnt
ttgcaattgtctgaaaacactgcacaaacgcccgagaatgcggcatctaccgccgaggac
attttattcgaatcgctagatcttgatggctcgctcatgcgtggcatcgacgcactggga
ttcgagaaatgctcgccaattcaggcaaagatcctgccctataccctcgagggacatgat
gccatcggcaaggctcagacgggcacgggcaaaacagcggcgtttctgattacgttattc
aatgacctgctgaataatcctattgagggggagcgttaccttgcagagccacgggccgtc
gtactggcacccactcgcgagttggtgatgcagataggcgatgatgctcgggagctgggt
aagttcaccggactcagtactgtgaccctgattggtggcgcagattatgcaaagcaactg
gccaaggtgaatgatcgcgtgaccgatattgttgtcgcgacgccgggtcgtctgatcgac
tttatacagcgtggtgatatgttccttgaccgtgttgagtctctggttttggacgaggcg
gatcgcatgctggatatggggttcatccctcaagtaaagcgtatcgtgaggtcaacgccg
agaaaggaagaccgacagacattgttgttctcggcgaccttcagcccagatattatgaat
cttgcgcgccagtggacgtttgatccaattacagtggaaattgagcccgagcgcgtggct
acagaaaatgttgagcagcgcgtttaccttctggagagtcgagaccgactcaatgttttg
aagcgtattcttgccgagcctgatgcaacatcggttattgtttttgcaaatcggcgagat
caagtgcgccgtgtttacgaacggctgaataaacagggcctagagtgcggcattttatcg
ggcgaggttgctcaggtgaaacgtacgaagaccctggagcgttttaaatcaggccgtatt
cgtgtgttgattgcgacagatgtggccggccgagggattcacgtggatggagtcagtcac
gtcatcaactacgatctgcccgaggaccctgaggactacgtgcaccgcataggccgaact
ggccgcgcgggtgaaaagggcatttctattagttttgcgagcgaggacgacgcgttctta
ctgcctgaaattgaggcgcttctgggtgagccgctaaaatgctcgcaagtccctgaggaa
ttactcgcagactaa

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