Phreatobacter aquaticus: E8L99_15950
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Entry
E8L99_15950 CDS
T09827
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paqt
Phreatobacter aquaticus
Pathway
paqt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paqt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E8L99_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqt03021
]
E8L99_15950
03400 DNA repair and recombination proteins [BR:
paqt03400
]
E8L99_15950
Enzymes [BR:
paqt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E8L99_15950
Transcription machinery [BR:
paqt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E8L99_15950
DNA repair and recombination proteins [BR:
paqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E8L99_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
Motif
Other DBs
NCBI-ProteinID:
QCK87145
UniProt:
A0A4D7QJA6
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All DBs
Position
3383785..3384801
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPEKLHIVPGDDPKRIATATAEPLERGFGVTLGNSLRRVLMSSLQGAAVS
AVQIDGVLHEFSSIAGVREDVTDIILNIKDIAIKMQGDGPKRMVVRKEGPGTVSAGDIQT
VGDVVILNPDLVICTLDEGASIRMEFTVDTGKGYVPAEKNRAEDAPIGLIPVDSLFSPVK
KVSYQVSPTREGQVLDYDKLTLTVETDGSVTPEDAIAYAARILQDQLEIFVNFEEPRKEV
VQETIPDLAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVTGWPPENIEELAKRFEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagaagaactggcaggaactgatcaagccggagaagctccacatcgttcccggc
gatgatcccaagcgtattgcgaccgccaccgccgagccgcttgagcgtggcttcggcgtg
acgctcggcaactcgctgcgtcgcgttctcatgtcctcgcttcagggcgctgccgtctcg
gccgtccagatcgacggcgtgctgcatgaattctcgtcgattgccggtgttcgcgaggat
gtcaccgacatcatcctgaacatcaaggatattgccatcaagatgcagggcgacggcccc
aagcgcatggtcgtgcgcaaggaaggcccgggcactgtcagcgccggcgacatccagacg
gttggcgacgttgtcatcctcaatccggatctcgtgatctgcaccctcgacgagggcgcc
tcgatccgcatggaattcaccgtcgacaccggcaagggctatgtcccggccgagaagaac
cgcgccgaagacgcgccgatcggcctgatcccggtcgacagcctgttctcgccggtcaag
aaggtctcctaccaggtctcgccgacccgcgaaggccaggtgctcgactacgacaagctg
accctgacggtggagaccgacggttcggtcacccctgaggacgcgatcgcctatgcggcc
cgtatcctgcaggaccagctggaaatcttcgtcaacttcgaagagccgcgcaaggaagtg
gtccaggagacgatcccggatctcgccttcaacccggcgctgctcaagaaggtcgacgag
ctcgaactgtcggttcgttcggcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggcggaaatgctccgcactccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgcttgcccagatgggcctccacctcggtatggaggttacg
ggttggccgccggagaatatcgaagagctcgcaaagcgcttcgaggaccattactga
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