Pectobacterium aquaticum: DMB82_0000465
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Entry
DMB82_0000465 CDS
T07653
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqu03021
]
DMB82_0000465 (rpoH)
Transcription machinery [BR:
paqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMB82_0000465 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UEM39571
LinkDB
All DBs
Position
113196..114053
Genome browser
AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLDAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccaaggcagtttggaaggatatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggatgcggctaagcacctgattctgtcacacctgcgtttt
gttattcatgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaagcggtacgtcgctttaaccctgaagtcggcgtgcgt
ctggtttctttcgccgtgcattggatcaaagccgaaattcatgaatacgtgctgcgcaac
tggcgtatcgtgaaagtcgcgaccactaaggcacagcgtaaactgttctttaacctgcgt
aagtcgaaaacgcgcctcggttggtttaatcaggatgaagtcgaactggttgcgcgtgag
cttggcgtgacgagcaaagacgtgcgcgagatggaatcccgcatggcggcgcaggacatg
acgttcgatccgacgcctgaagaagattcacacgacggcaaggcgatgtcgccgatgctt
tacctacaggataaatcgtctgactttgccgatggcattgaagaagataactgggaaacg
catgcggccgataagctcacctacgcgctggaagggctggacgaacgcagccagcacatt
attcgcgcccgctggttggatgatgacaacaaatccaccttgcaggagctagccgatcaa
tacggcgtttccgcagagcgtgtgcgtcagctagaaaagaatgcgatgaaaaaactgcga
gcggccatagaagcttaa
DBGET
integrated database retrieval system
