KEGG   Pectobacterium aquaticum: DMB82_0001790
Entry
DMB82_0001790     CDS       T07653                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
paqu  Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:paqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paqu03000]
    DMB82_0001790
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:paqu02048]
    DMB82_0001790
Transcription factors [BR:paqu03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    DMB82_0001790
Prokaryotic defense system [BR:paqu02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    DMB82_0001790
SSDB
Motif
Pfam: HTH_3 HTH_26 HTH_31 HTH_19 HTH_37 ForC_N Fis1_TPR_C
Other DBs
NCBI-ProteinID: UEM39799
LinkDB
Position
390183..390599
AA seq 138 aa
MMYADAIKAANNLTSIVPFLGGSTSRKDYEDALKLTEYLIESEPDSPLIDMLTAKIDKYE
DDAPEFAAFNERVKALPAGIALLRVLMDQHQLTQSDFEAEIGKKSLVSRILNGERTLTLD
HMRALAKRFDIPVSAFVD
NT seq 417 nt   +upstreamnt  +downstreamnt
atgatgtacgcagacgccatcaaggcagctaacaacctgacgagtatcgtaccattcctt
ggaggcagcacctctcgtaaggattatgaggatgcgctgaaactaaccgaatacctgatc
gagagtgaacctgacagtccgctaatcgatatgctgactgccaaaattgacaaatacgaa
gatgatgcaccggagtttgcagccttcaacgaacgtgttaaagcactcccagccggtatc
gctttactgcgcgtccttatggatcagcatcagctaacgcagagtgattttgaagctgag
attggtaaaaagtctctggtatcccgcattctaaatggtgagcgcactctaacgcttgat
cacatgagagcgcttgctaaacgattcgatattcctgtgagtgcttttgttgattga

DBGET integrated database retrieval system