KEGG   Pectobacterium aquaticum: DMB82_0005105
Entry
DMB82_0005105     CDS       T07653                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
paqu  Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:paqu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paqu02044]
    DMB82_0005105 (tssF)
Secretion system [BR:paqu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DMB82_0005105 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UEM40395
LinkDB
Position
1088004..1089770
AA seq 588 aa
MSLEHFFRDELTYLRLQGREFAKAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIE
DEFPELTHGLLGMLWPNYLRPVPSMTIMQFSVLPGAIAQPAFVERGCELDSLPIDDVVCH
FQTCHDAWIYPADIREIKVQSGNDLSTITLDVGLHGPLSLSDLQLDKLRFYLGGDTYTAY
ELYFWIASQLSHIELEIDGQRFRQEASVLKTVGFEREDALLPYPGNVYSGYRILQEYFCF
PESFLFFQLAGAVWPDLPLTVTEFRLHFCFDRPLPAELKIRPDSFMLNCVPAINLFQHDS
EPINLSGRQTDYPLKASYRNADSFEIFSVDKVEGWVEGNSGRARGIPRTYQPFESFQHQI
ERAKGRLALYYRIRVREAVNGNGFDHMLSFVRGDEQEVIDLDESISVTLTCTNRSRAAKL
PVGSICVPTGNSPSFATFRNLVRPTRPLRPAMDGSLHWTLISNLSLNYVSLLRRDALVQI
LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLVQGMPVRGLKSILSVRQSAFSSEG
ELYLFSTVLAHFFSLYASVNAFHLLEVVNIDNKERYRWPVQIGQHSMM
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtcactggaacattttttcagggatgagctgacctacttgcgcctgcaagggcgtgaa
ttcgccaaggcgcaccctgagcttacccgatttttgtcagaacaaaccacggatccagac
gtcgagcgtttgctggaagggttcgcctttttgacagggagcctgcgggcgaagatcgag
gatgaatttccggaactgacacacggtctgctgggcatgctgtggcctaattacctgcgc
cccgtaccgagcatgacgattatgcagttttcggtactccccggcgcgattgcccaaccc
gcgtttgttgagcgcggctgtgagcttgatagcctgccgattgatgatgtggtttgccat
tttcagacctgtcacgatgcctggatttatccggcggatatccgtgaaatcaaggtacag
agcggcaacgatctttccaccattacgctggacgttgggctgcatggcccgctatcgcta
agcgacctgcaactcgacaaactgcgcttttatctgggcggtgatacttatacagcctac
gagctctatttctggatcgccagtcagctgtcgcacattgagctggaaatcgatggtcag
cgcttccgtcaggaagccagcgtgctgaagacggtcggctttgagcgggaagatgcacta
ttgccgtatcccggtaacgtttattcgggctaccgcatcttgcaggaatacttctgcttt
cctgaaagttttctctttttccaactcgcgggcgcggtatggcctgatctcccgctgacg
gtaacggaattccgtctgcatttttgctttgaccgcccgctgccggcggaactgaagatc
cgtcctgattcgttcatgctcaactgcgtgccggcaatcaatctcttccagcatgatagc
gaaccgatcaatctcagcggacgccagacggattacccgctgaaagccagctaccgcaac
gccgatagctttgaaatcttctctgtggacaaggttgaaggctgggttgaagggaattca
ggccgtgctcgggggattccacgtacctatcagccttttgagagttttcagcaccaaatc
gaacgtgccaaaggacggctcgcgctctattaccgtattcgggtaagagaagcggtgaac
ggcaacgggtttgatcacatgctctcttttgtccgtggcgatgagcaggaagtgattgat
ttggatgaatccatctcggtgaccctgacctgtaccaaccgatcgcgtgcggcgaaactg
cccgttgggtcgatctgcgtacccaccggcaattcaccgtctttcgcgacgtttcgcaat
ctggtgcggccgacgcgaccgctgcggcctgcgatggatggcagcctgcactggacgctg
atctccaacctgtcgctgaactatgtgtcgctgctgcggcgcgatgcgctggtgcagatc
ctgcgtacttatgatttcccggcgctgcacgacaagcaggcagaacaagcctcgcgtaag
cgtctggcagggatcgaatctatcgaaaccacccctatcgaccgtctggttcaggggatg
ccggttcgtggcttgaaatccatcctgtcagtacggcaatccgcgttttccagtgaagga
gaactctatctgtttagcacggtgctggcgcacttcttctcgctatacgccagcgtcaac
gccttccacctgttggaagtcgtcaacatcgataacaaggagcgctaccgatggccggta
cagataggtcaacactcaatgatgtga

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