Pectobacterium aquaticum: DMB82_0005440
Help
Entry
DMB82_0005440 CDS
T07653
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu02024
Quorum sensing
paqu03060
Protein export
paqu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DMB82_0005440 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DMB82_0005440 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DMB82_0005440 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paqu02044
]
DMB82_0005440 (ffh)
Enzymes [BR:
paqu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DMB82_0005440 (ffh)
Secretion system [BR:
paqu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DMB82_0005440 (ffh)
Eukaryotic Sec-SRP protein
DMB82_0005440 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
VirC1
AAA_31
AAA_30
AAA_16
YqeC
AAA_24
AAA_33
KTI12
APS_kinase
AAA_14
TsaE
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UEM40443
LinkDB
All DBs
Position
1158440..1159801
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELVSAMGEINAELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVQEKPLAIVERALQHAK
LKFYDVLLVDTAGRLHVDDAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPERVASRILGMGDV
LSLIEDIESKVDRTQAEKLANKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKMPGMGQL
PDNVKSQMDDKVLVRMEAIINSMTRQERAKPEIIKGSRKRRIAQGSGMQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaactgatcgactctcgcgcacattgcgcaatatcagcggccgcggg
cggttgactgaagacaacatcaaagaaacgctgcgtgaagtccgtatggcattgctggaa
gccgacgtcgcgttacccgtggtgcgtgactttatcaatcgcgtgaaagagcgcgctgtc
ggacatgaggtcaacaaaagcctgacgccgggccaagaattcgtcaagattgttaaaaat
gaactcgttagcgcaatgggtgaaatcaacgccgagctgaatcttgccgcgcaaccgcct
gcggttgttctgatggccggtctgcaaggtgcgggtaaaacgaccagcgtaggtaagctg
ggtaaattcctgcgcgaaaagcataagaaaaaagtgctggtggtatcagctgacgtttat
cgccctgcggcgataaaacagttggaaacgttggcagagcaggtaggtgtcgatttcttc
ccgtcagacgtgcaggaaaagccacttgctatcgtagaacgtgcgttacaacacgctaag
ctgaagttctacgatgtcttgttagtcgataccgcaggtcgtctccacgttgacgacgcg
atgatggacgaaatcaagcaggttcacgcggcgattaagccggttgaaacgctgtttgtt
gttgatgccatgacgggacaggatgcagcgaatacggcgaaagcttttaatgaagcgctg
ccgctgactggtgtgatcctcaccaaaattgatggtgacgcccgtggtggtgcggcgtta
tctatccgccatattactggcaagccaattaaattcctcggtgtcggcgaaaaaaccgaa
gcgctggagccgttctaccctgagcgcgttgcctcgcgaattctcggtatgggcgatgtg
ctttcactgattgaagatattgaaagcaaggtcgatcgtacacaggcagagaagcttgct
aataaactgaagaagggcgatgggtttgatttgaccgatttcctggaccagctcaagcag
atgcgtaacatgggcggcatggcaagcatgatgagcaaaatgccgggcatgggccaactg
cctgataatgttaaatcacaaatggatgacaaggtgttggtgcgtatggaggcgatcatt
aattcgatgacgcgtcaggagcgtgccaaacctgagattattaaaggatcgcgtaaacgt
cgtatcgcgcagggttccggcatgcaggtacaggacgtgaaccgtcttctgaaacaattc
gatgatatgcaacgaatgatgaagaagatgaaaaacggcggtctagcgaaaatgatgcgc
ggtatgaaagggatgatgccacctggattcccagggcgttaa
DBGET
integrated database retrieval system
