Pectobacterium aquaticum: DMB82_0006060
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Entry
DMB82_0006060 CDS
T07653
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00260
Glycine, serine and threonine metabolism
paqu00460
Cyanoamino acid metabolism
paqu00630
Glyoxylate and dicarboxylate metabolism
paqu00670
One carbon pool by folate
paqu00680
Methane metabolism
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01120
Microbial metabolism in diverse environments
paqu01200
Carbon metabolism
paqu01230
Biosynthesis of amino acids
paqu01240
Biosynthesis of cofactors
paqu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DMB82_0006060
09102 Energy metabolism
00680 Methane metabolism
DMB82_0006060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DMB82_0006060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DMB82_0006060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DMB82_0006060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DMB82_0006060
Enzymes [BR:
paqu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DMB82_0006060
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UEM40543
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Position
1300850..1302103
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVIPYGIDESGKIDYDEMAELARTHKPKMIVGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAADVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLSRGFNVVSGATSNHLFLLDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAATRRGFKEAEVRELAGWICDVLDNINDEATIERVKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgacctgtggcaagcaatggag
caagaagtggtgcgtcaggaagagcacattgaactgattgcgtcagaaaactacaccagc
ccacgcgttatgcaggctcaagggtctcagctgacgaacaagtatgctgaaggttatccg
ggcaaacgttactacggtggctgtgagtatgttgatatcgttgagcaactggcgatcgac
cgtgcgaaagcgctgttcggtgcagattatgccaacgtgcagccgcactccggctctcag
gcgaactttgccgtttacaccgcgctgctgcagccgggcgacaccattctgggtatgaac
ctggcacacggtggtcacctgacgcacggttctccggttaacctgtcgggcaaactgtat
aacgtcattccttacggcatcgacgaaagcggcaagatcgactacgacgaaatggctgaa
ctggcgcgtacgcataagccaaaaatgatcgttggcggtttctccgcttactctggcgtg
gttgactgggcgaagatgcgcgaaatcgctgacagcatcggtgcttacctgtttgttgat
atggcgcacgttgccggtctgattgcagccgatgtttaccctaacccagttcctcatgcc
cacatcgtgaccaccaccacgcacaaaacgctggctggcccacgcggtggcctgattctg
gcgaaaggcggcgacgaagagctgtacaaaaaactgaactcagctgttttccctggtggt
cagggcggcccgttgatgcacgttatcgcgggtaaagcggtggcgctgaaagaagcaatg
gagcctgaattcaaggtttatcagcagcaggtcgcgaaaaacgccaaagcaatggttgaa
gttttcctgtcgcgtggttttaacgtcgtttctggtgcaaccagtaaccacctgttcctg
ctagatctggtgagcaaaaacctgaccggtaaagaagcggatgctgcgctgggccgtgca
aatatcaccgtgaacaaaaacagcgtgcctaacgatccgaagagcccgtttgtgacttct
ggtatccgtatcggcacgccagcggcaacccgtcgcggctttaaagaagcggaagtgcgt
gaactggctggctggatctgtgatgtgttagacaacatcaacgacgaagcgaccattgaa
cgtgtgaaacagaaagttctggatatctgcgcccgcttcccagtttacgcataa
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