Pectobacterium aquaticum: DMB82_0008660
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Entry
DMB82_0008660 CDS
T07653
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paqu03009
]
DMB82_0008660 (rimO)
Enzymes [BR:
paqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DMB82_0008660 (rimO)
Ribosome biogenesis [BR:
paqu03009
]
Prokaryotic type
ribosomal protein modification factors
DMB82_0008660 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UEM41014
LinkDB
All DBs
Position
complement(1835531..1836844)
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AA seq
437 aa
AA seq
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MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DNVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLTEAKLDRVGCFKFSPVEGAAANELPDQVPEEVKEARFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDGEGAIGRSMADAPEIDGAVYLNGETDVKVGDIV
KVKVEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtcccacgttatgacgac
gctgagctggtgatcgtcaatacctgtggttttattgacagcgcggtacaagagtcgctg
gaagccatcggcgaagcgctgaatgagaacggtaaagtcatcgtaacgggctgtttgggt
gccaaagaaaatcaaatacgcgaagtacatccaaaagttctggaaattaccggtccgcac
agctatgagcaggtgctctcacacgtacatcaatacgtcccgaaaccgacgcataacccg
tttaccagtttagttcccgagcaaggtgtgaaactcacgccgcgccattacgcctatctg
aaaatttcagaaggctgtaaccaccgctgtacgttctgcatcatcccttctatgcgtggc
gatttagacagccgtccaatcggttcggtgttggatgaagcaaaacgtctggttgatgca
ggggtaaaagagctgctggtgatttctcaggatacctcagcgtacggcgcggatgtgaag
cagcgtactggcttttggaacgggcaaccggtcaaaaccagcatggtcagcctgtgtgag
caactggcatcgctcggcgtgtgggtgcgcctgcactatgtctacccgtatccacacgtg
gacaatgtgattccgttaatggcagaaggcaaaatcctgccttacctggacatcccgctc
cagcacgccagcccaaaaattctcaagctgatgaaacgtccgggtgcagtcgaaagaacg
ttggagcgcattaagcgctggcgcgaaatctgcccggacttaacgctgcgttctaccttt
attgtcggcttccctggcgaaacggaagaagatttccagatgctgctcgacttcctgaca
gaagccaaacttgaccgcgtgggctgctttaaattcagcccagtcgaaggcgcagcggca
aatgaattgccagatcaggtgccggaagaggtcaaagaagcgcgtttccatcgcttcatg
caacttcagcaggcgatttccacccagcgtttgcaggataaaattggccgtgaagtgctg
gtgctgatcgatgaaatcgacggagaaggcgcgattggccgcagcatggctgacgcccct
gaaattgacggcgcggtttacctgaacggcgaaaccgatgtgaaagtcggtgatatcgtc
aaagtgaaagtcgaacacgcagatgaatacgatctgtggggtagccgagtttaa
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