Pectobacterium aquaticum: DMB82_0009115
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Entry
DMB82_0009115 CDS
T07653
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DMB82_0009115 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paqu02000
]
DMB82_0009115 (msbA)
Enzymes [BR:
paqu01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DMB82_0009115 (msbA)
Transporters [BR:
paqu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DMB82_0009115 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
DUF87
APS_kinase
AAA_22
AAA_29
AAA_16
RsgA_GTPase
AAA_25
SLFN-g3_helicase
AAA_30
AAA_18
ABC_membrane_2
AAA
MMR_HSR1
AAA_15
nSTAND3
HUTI_composite_bact
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UEM41402
LinkDB
All DBs
Position
1943556..1945304
Genome browser
AA seq
582 aa
AA seq
DB search
MLNDKDLSTWQTFRRLWPMISPFKAGLAAAAIALIINAAGDTLMLSLLKPLLDEGFGKAE
RSVLLWMPLVVIGLMLVRGASGFVSSYCVSWVSGKVVMNMRRRLFSHIMGMPVSFFDQQS
TGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSI
AMRVVSKRFRNISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFDQVSNRMRQQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDMEQERDTGKLEIERAKGELEFRQVNFAYPGRENLALK
NINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVA
LVSQNVHLFNDTVANNIAYARNEHYSREDIERAATMAYAMDFINKMEHGLDTIIGENGVM
LSGGQRQRIAIARALLRNSPILILDEATSALDTESERAIQSALDELQKDRTALVIAHRLS
TIEKADEILVVEDGRIIERGDHTALLAANGAYAQLHRMQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgataaagatctctccacttggcagacttttcgccgcctatggccgatgatc
tctccttttaaggcagggcttgctgctgctgcaatcgcactcattattaacgcagctggc
gatacgttaatgctttctctgctcaagcccctattagatgagggatttggtaaagcagaa
cgttccgtattgctgtggatgccgctggtcgtcattgggttgatgctcgtgcggggggcg
tcaggttttgtttccagctattgcgtttcctgggtttccggcaaagtggtgatgaatatg
cgtcgccgcctattctcccatattatgggtatgccggtgtcgttcttcgatcagcagtca
actgggacattgttatcccgcattacctatgattcggagcaggttgcagcgtcgtcatct
ggcgcgttgattacggttgtcagggaaggggcatcgattatcggcctgtttattctgatg
ttctactacagttggcaactgtccatcatcctgattgtgattgcgccgatcgtatcgatt
gctatgcgtgtggtatccaaacgcttccgcaatatcagtaaaaacatgcaggacacgatg
ggccatgtcactaccagcacggaacaaatgcttaaaggccacaaagaagtgctgatgttt
ggcggtcaggacgttgagactaaacgtttcgatcaggtcagcaaccggatgcgtcagcag
ggcatgaaaatggtgtccgcctcgtcaatttccgatcccatcattcagttgattgcttcg
ctggcattggcctttgtgctgtatgccgctagtttccccagcgtgatggaaaccttaacg
gctgggacgatcacggtggtgttctcttccatgattgcgctgatgcgtccgctaaaatca
ctgaccaacgtgaacgcgcagttccaacgcggtatggctgcatgccaaacgctgttcgcc
attctggatatggaacaggaacgtgataccggcaaactggaaatcgaacgtgctaaaggt
gaactcgaattccgtcaggtgaatttcgcctatccaggaagagaaaatctggcgctgaag
aatatcaatctgcatattcccgtgggtaaaacggtggcgttggttggtcgttctgggtca
ggtaaatcgactattgccagtttgatcacgcgtttttacgatattcaatccggtgaaatt
ctgctcgatggtcacgatctacgtgagtatcgtttgtcttccttacgcaatcaggtggca
ctggtttctcaaaacgttcatttgttcaacgatacggtagcgaacaacatcgcctatgcc
cgcaatgagcactatagccgtgaggacatcgagcgtgcggccacaatggcgtatgcgatg
gacttcatcaataagatggaacatggtctggatacgatcattggtgaaaatggcgtgatg
ctttccggtggacagcggcagcgcatcgcgattgcccgtgcgctattacgtaatagcccg
atactgatattggatgaggcgacgtcggcgctggacacggaatctgaacgtgccattcag
tctgcactagacgaactgcaaaaagatcgtaccgcactggtgattgcacaccgcctttcc
acgattgaaaaggcagatgagattctggtggttgaagacggcagaattattgaacgtggt
gaccatactgccttgctggcggcgaacggtgcctatgctcaactgcatagaatgcagttt
ggcgaatga
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