Pectobacterium aquaticum: DMB82_0009370
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Entry
DMB82_0009370 CDS
T07653
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DMB82_0009370
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paqu01002
]
DMB82_0009370
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paqu01011
]
DMB82_0009370
Peptidases and inhibitors [BR:
paqu01002
]
Cysteine peptidases
Family C82
DMB82_0009370
Peptidoglycan biosynthesis and degradation proteins [BR:
paqu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DMB82_0009370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
UEM41143
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All DBs
Position
2011743..2012765
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AA seq
340 aa
AA seq
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MKRALTLLGMAFAAYLTSTAAKATEYPLPPPNSRLIGENIAYTVPNDGRPLEAIAADFKI
GLLGMMEANPGVDPYLPTAGSTITIPTQMLLPDTPREGIVVNLAELRLYYYPKGKNTVIV
YPIGIGQLGRNTPLMTTSVREKRENPTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGL
HALRLSAHGGVYLLHGTNADFGIGMRVSSGCIRLRPDDIKALFDNVPVGTRVQIVNDAIK
TSVEPDGKRYVEVHQPLSKTDKDDPQTMPIPLTAKAQKFVKDAETDSKAVADAIVRRSGM
PIVVSVGQDINTYQSPVESAPEAPKTHQVAPITAISTTAR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcgttaactttacttggtatggccttcgcggcatatctgaccagcaccgct
gctaaagcgacggaatacccgctaccgccacccaatagccgacttattggcgaaaacatc
gcttatacggtccccaatgatggtcgtccgctggaagctatcgcggcggatttcaagatt
ggtctgttgggcatgatggaagcgaatcctggtgtggatccttacctgccgactgcgggt
tccacgatcacgatccccacgcaaatgctgctgccggataccccacgtgaaggtattgtg
gtcaatctggcggagctgcggctctactactacccgaaagggaagaataccgtcatcgtt
tacccaatcggcatcggtcaactggggcgtaatacgccactgatgacgaccagcgtaagg
gaaaagcgtgaaaatccgacctggacgccaacggcgaacatccgtaagcattatcttgaa
gagcagggcattaaactgcccgcagtcgttccagcgggtccagataacccgatggggtta
cacgcgctgcgtctgtcagcacacggcggcgtttatctgctgcacggtacgaacgcggat
ttcggcatcggtatgcgcgtaagttccggctgtatccgcctgcgcccagatgacatcaag
gcgttattcgacaatgtgccagtcggtacgcgagtgcagattgttaacgatgcgattaaa
acttccgttgaacccgacggtaaacgctacgttgaagtacatcagcctctgtcgaaaact
gataaggacgatccacaaaccatgccgattccgctgacggcgaaggcgcagaagtttgtt
aaggatgcggagacggacagtaaagcggttgctgatgcaattgtgcgtcgttcaggcatg
ccaattgtggtgagcgtagggcaagacatcaatacctaccagtcaccggtagagtcggct
ccagaagcgcctaagacgcatcaggttgcgccgatcacggcgatcagtaccacagctcgg
taa
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