Pectobacterium aquaticum: DMB82_0010380
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Entry
DMB82_0010380 CDS
T07653
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paqu03000
]
DMB82_0010380
Transcription factors [BR:
paqu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DMB82_0010380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
zf-C2H2_2
HTH_31
TetR_N
HTH_IclR
MarR_2
TrmB
Sigma54_DBD
DUF7343
HTH_Tnp_ISL3
HTH_10
HTH_6
HTH_38
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
UEM37623
LinkDB
All DBs
Position
complement(2242727..2243752)
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AA seq
341 aa
AA seq
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MSTMQEVAKKAGVSKATVSRVLSGKGYTSEETKTLVYQAIEETGYRPNLLARNLATSKSA
CIGLVVTNTLYNGSYFNELLSQAAKKLEDNGRQLILVDGKHSADEERAAIQFLLGLRCDA
IIIYPRFLNVDEMDDIIEKHKQPIMVVNRKLRKHQSHCICCDHKGSSYNATQHLIARGHR
DIAFITGSLDSPTAIERLSGYKDALTAANIAVRDELIVKGKWTPRSGSLAINALRDNRVS
FSAVLASNDDMAIGAIKALDDAGVAVPHDVSVVGFDDIPTAPFLKPSLSSVKDPVSDMIN
EVINRLIAMLDGGYFSKDNLFLSELQVRDSIQNGPYGNPPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggcgaagaaagcaggcgtatcaaaagcgacggtgtcgcgc
gtgctatcgggcaaaggctataccagtgaagaaaccaaaacgctggtctatcaggccatt
gaggagacgggatatcggcccaatttactggcacggaatctggcgaccagcaaatcagcc
tgtattggtttggtggtgaccaacacgctctataacggcagctattttaacgaactgctg
tcacaggccgccaagaaactggaagacaacgggcgtcagttgattctggtcgatggtaaa
cacagcgctgatgaagaaagagccgcaattcaattcctgctggggttacgctgtgatgcg
atcatcatctatccccgttttctcaacgtggatgaaatggacgacatcatcgagaagcac
aagcagccgatcatggtggtcaaccgtaaactgcgtaaacaccagagccactgcatctgc
tgcgatcacaaaggttccagctataacgccacgcagcatctgatcgcgcgcggccataga
gatatcgcttttatcaccggttcgctggattcgccgacggctatcgaacgcctttccggc
tataaagatgccctgacggcggccaatattgcggtacgggatgaattgattgtgaaagga
aaatggacgccgcgcagcgggtcgcttgccattaacgccctgcgcgataaccgggtatcg
ttcagcgccgttctcgccagcaatgacgatatggcgattggcgcgataaaagcgttggat
gacgctggcgttgccgtaccgcacgacgtttctgtcgtcgggttcgacgatattcccacc
gccccgtttttgaaaccgtcgctctccagcgtcaaagatccggtgagcgatatgatcaac
gaagtgattaaccgcctgatcgcgatgctggacggcggctatttctcgaaagacaatctg
ttcttgtcggaattacaggtcagagattccattcagaacgggccgtacggtaacccgccc
gtttga
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