Pectobacterium aquaticum: DMB82_0012875
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Entry
DMB82_0012875 CDS
T07653
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05804
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paqu03000
]
DMB82_0012875
03036 Chromosome and associated proteins [BR:
paqu03036
]
DMB82_0012875
Transcription factors [BR:
paqu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DMB82_0012875
Chromosome and associated proteins [BR:
paqu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DMB82_0012875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UEM38083
LinkDB
All DBs
Position
complement(2743378..2744238)
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AA seq
286 aa
AA seq
DB search
MNSFTRDLLIWIEKNLDQKISLEDVSVRAGYSKWYLQRLFRAETGLTLASYIRQRKLYRA
AIMLKMTSLSVIEIVDRLGFSTQQTFTRTFKRHFGLAPGRYRESELWDFDGLLPEFTGEY
PVLPAPQRIMANLHTLPGISLSYNCNSTDLGNVRLHTEQRQALFRIAGKMPNDVFPISFA
AMCEPSSSNAEQINFSLTFAKVIPEGHTSLDGAAAFLRFPFQGTPEQLTEMQVNIYDHIM
PLRREARRTGHDFFICESKVEPYKGELSFRGCYYIPVTDKKAQIDC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctttacgcgagatttattgatttggattgaaaaaaatcttgaccagaaaatt
tctctagaagatgtttcagtaagggcaggatacagtaagtggtatcttcagcgactgttc
agggctgaaaccggacttacactcgcttcctacatccgccaaagaaagctatacagggct
gcaatcatgctgaaaatgaccagcctttccgttatcgaaatagttgataggttgggtttc
agtacgcagcaaacatttacccgtaccttcaagcgtcattttggtctggcgccaggtcgc
tatcgtgagtctgagctctgggattttgacgggctgcttcccgaatttactggagaatat
ccagtattgccagccccgcagcgtattatggcaaatctgcatacactaccgggtatcagt
ctgagctataactgtaacagtacggatcttggtaatgtgcggctccacaccgagcagcgc
caggcattatttcgcatagccggaaaaatgccgaatgatgtatttccgatatccttcgct
gcaatgtgtgaaccgtcttccagtaacgctgaacaaataaacttcagcctgacgtttgca
aaagttatcccggaaggccacaccagcttagatggtgcagcggcatttctacggtttcct
tttcagggaacacctgagcagttgacagaaatgcaggtaaatatttacgaccatattatg
ccacttagacgcgaagcccgccggaccggacatgatttttttatatgcgaaagtaaggtg
gaaccatataaaggtgagttaagcttccgggggtgttattacatacctgtaactgacaaa
aaagctcaaatcgattgttaa
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