Pectobacterium aquaticum: DMB82_0014230
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Entry
DMB82_0014230 CDS
T07653
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00020
Citrate cycle (TCA cycle)
paqu00640
Propanoate metabolism
paqu00660
C5-Branched dibasic acid metabolism
paqu00720
Other carbon fixation pathways
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01120
Microbial metabolism in diverse environments
paqu01200
Carbon metabolism
Module
paqu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paqu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DMB82_0014230 (sucD)
00640 Propanoate metabolism
DMB82_0014230 (sucD)
00660 C5-Branched dibasic acid metabolism
DMB82_0014230 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
DMB82_0014230 (sucD)
Enzymes [BR:
paqu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DMB82_0014230 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UEM38321
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All DBs
Position
complement(3051101..3051973)
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AA seq
290 aa
AA seq
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MSILINKNTKVICQGFTGSQGTFHSEQALAYGTQMVGGVTPGKGGTEHLGLPVFNTVREA
VEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQSGARMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSCVGIGG
DPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILPR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgattaataaaaataccaaagttatctgtcagggttttaccggtagtcag
gggacattccactctgagcaagcacttgcttacggtacgcaaatggtcggtggtgtgacg
ccgggtaaaggcggcacggaacatctgggtctgccagtatttaatacggtgcgtgaagcg
gtagaagcgacgggcgcaacggcatcggttatctacgtccccgctccgttctgtaaagac
tccattctggaagcgattgacgcaggtattgagctgatcatctgtatcaccgaaggtatc
ccgacgttggatatgctgacggtgaaagtgaaactcgaccagagcggtgcgcggatgatt
ggccctaactgcccaggtgtgatcacgccaggcgaatgtaagatcggtattatgccgggc
catattcacctgccgggtaaagtcggtatcgtttctcgctctggtacgctgacgtatgaa
gcggtgaagcaaacgaccgatgcgggtctgggtcagtccagctgtgtaggtatcggcggt
gacccgattccaggttctaacttcatcgatatcctgaagctgtttgagcaggatccgcaa
acggaagccatcgtgatgatcggtgaaatcggtggtacggcagaagaagaagcggctgcc
tacattaaagagcacgtgacgaagccggttgtcggctacatcgcgggtgtgacagcaccg
aaaggcaagcgcatgggccatgctggcgccatcatcgcgggtggtaaaggtactgctgac
gataaattcgcagcgttagaagcagcgggtgttaaaaccgttcgcagcctagcggatatc
ggcgatgcagtaaaagcaatattaccgcgttaa
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