Pectobacterium aquaticum: DMB82_0014650
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Entry
DMB82_0014650 CDS
T07653
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00300
Lysine biosynthesis
paqu01100
Metabolic pathways
paqu01120
Microbial metabolism in diverse environments
paqu01230
Biosynthesis of amino acids
Module
paqu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DMB82_0014650 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paqu01002
]
DMB82_0014650 (dapE)
Enzymes [BR:
paqu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DMB82_0014650 (dapE)
Peptidases and inhibitors [BR:
paqu01002
]
Metallo peptidases
Family M20
DMB82_0014650 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
UEM38392
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All DBs
Position
3133498..3134625
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AA seq
375 aa
AA seq
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MSCPVIELAQLLIKRPSLSPNDEGCQALMIERLTAIGFTVEAMDFGDTQNFWAWRGTGKT
LAFAGHTDVVPSGDESHWQHPPFEPIIRDGMLYGRGAADMKGSLAAMVIAAERFVATHPN
HQGRLAFLITSDEEASAVNGTVKVVEALMARNERLDYCLVGEPSSTHVVGDVVKNGRRGS
ITANLRVHGVQGHVAYPHLADNPFHRAVPALNELIATEWDQGNDFFPPTTMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDVLIQQRVAELLDRHQLNYTIDWTLSGQPFLTARGEL
VDAVVNAVKHYNEVTPELLTTGGTSDGRFIARMGAQVVELGPVNATIHKVDECVSAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttgcccagtcatagaactcgctcaactgttaattaaacgcccttccctcagcccg
aatgacgagggttgccaggcgctcatgattgaacgcctgacggcgattggctttaccgtc
gaagcgatggattttggcgatacccagaatttctgggcatggcgcggcacggggaaaacg
ctggccttcgccggacacaccgatgtggttcccagcggtgatgaaagccactggcagcat
ccaccgtttgaacccatcattcgtgacggcatgctgtatggtcgtggcgcggcggacatg
aaaggttcactggctgcaatggtaattgccgccgagcgttttgtcgccacccatcctaat
catcaagggcgtctggcgttcctaattacctcggacgaagaagccagcgccgttaacggc
accgtaaaagtggttgaggcgctgatggcacgcaacgagcggctggactactgtctggtc
ggcgagccgtccagtacgcatgttgtaggcgatgtggtaaaaaacggccgtcgtggttct
atcaccgcgaatctgcgtgtacacggcgtgcaagggcacgttgcctaccctcatctggcg
gacaacccctttcaccgtgcagtaccggcgcttaacgaactgatcgccaccgagtgggat
cagggcaacgacttcttcccaccgaccacgatgcaaatcgccaatatccaggcaggtacc
ggcagcaataacgtcatccccggcgagttatttgtgcagttcaatttccgcttcagcacc
gaattgacggatgtcttaatccagcagcgcgtggcggaattactggatcgccaccagctt
aattacaccatcgactggacgctctccggccagccattcctgaccgcacgcggcgaactg
gtcgatgccgtagtgaatgccgtcaaacattacaacgaggttacgccagagttgctgacc
accggcggcacttcagatggccgtttcattgcccgcatgggcgcacaggtcgttgaactg
ggccccgtcaatgccacgatccacaaagtcgatgaatgcgtcagcgcagcagacctacag
ctactgagccgcatgtatcagcgcattatggagcagctcatcgcatga
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