Pectobacterium aquaticum: DMB82_0015325
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Entry
DMB82_0015325 CDS
T07653
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqu03400
]
DMB82_0015325
DNA repair and recombination proteins [BR:
paqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DMB82_0015325
Archaeal homologous recombinant proteins
DMB82_0015325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
ABC_tran
Death_MADD
cobW
SMC_N
AAA_21
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEM38516
LinkDB
All DBs
Position
3289220..3292903
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALNTLQARASGIQLLTDEQRQQVEGQLAELLQQEHRGNVERE
QALTTLRWFEQLTQQHTQKTNTQAQHESAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLALAQNLEQLTAKQAAEQVTLTALRQQEEKAEQDGSEHKRVRQQQEQVINEQVV
PLDHRITMLEQQKTQQQDELAKTQARLHADESKQTQTAAEQQQATQQLEQIQSYRQQYAH
HQQWGEQLPLWRTQFRQLRQLQYEQEKLKQKQAQHTAQSATLQQEAVTLAAQQREQQAVV
DAARQQFTQHDETRQHQEAHQSLSALQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQY
LTKQGEVQEHISQSQILLKQQQSEHEQRSQHLADLETLHRQEEHIVKLEAERQRLQAGDP
CPLCGSTEHPAIERYQALQPSETQSRLTALQQEVNQLTTALANTTAQLASLEQQREQLQQ
DIAQLDSEHHALLQQWQDVSERLQVNYTLEQPDEIAAWLTQNEAEEQAIRQQITTREQVQ
KQWQESKDLLTATEALQRELDQKIALNTQQQTSLNVTQQETEQSLQNVHQQITQHIQEIT
QALANVGLLLPEADAQDDWLTQRESEWQDWKTKEQEQSRLVPLLATLESDLQHLNRSVTE
AKQQLQTQQQQLEQHLALLNASQQERLALFGDKQIVAVREQLQQTSQQYDDALRLAQSAR
QQTETTLSRLTGELASTQQQYEQSTRKHENAADRFSQALQQSTFADEMTFLNALLDEQER
QTLQAWKEKLYQSLQQAAALHQQAERDLLAHQQKRPASLTEDATEEAVQQQLAALDETLK
TNLRQQGEFQHQLADDKQQRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDELELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNAAGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgcttaaagaatctcaacgcgctgaaaggcgaatggaagatc
gacttcacgcaggagccgttttccagcaatggcttatttgccattaccggcccgaccggc
gcgggaaaaaccacgctgctggatgccatctgtctagcgctgtatcacgaaacgccacgg
cttggcctgctttccgccagccagaatgacctgatgacgcgtaataccgctgagtgcctt
gccgaagtcgagtttgaagttaaaggcgtcggatatcgcgctttctggagccagcgtcgg
gcaagaaacgccccagacggcaatttgcagtctcccaaagccgaactcgcgctcatagaa
gacggcaaaattctgtgtgaaaagctcaatgataagaaagagatgatcacacagctcact
ggtttggattttggccgcttcacgcgatccatgatgctgtcacaggggcagtttgccgcc
ttcctcaacgccaaagcagacgaccgagcggaactgctggaagagctgaccggcacggac
atttacggcctgatttccgaacgcgtctatgacaagcacaagcaggcaaacgtcgcattg
aacacgctacaggcgcgcgcatcagggattcaacttttaaccgatgagcagcgtcagcag
gtggaaggacagcttgccgaattgctccagcaggagcaccggggcaacgtcgaacgtgag
caagcgctgactacgctgcgttggtttgagcaactgacgcagcagcacacgcagaaaacc
aatacgcaggcgcaacatgaaagtgccgaatccgccattcagcaggctaaaccgcagctc
gaccgcttaactcacagcgaaccggcagaaaaactgaggccgctacatcaggaacgcgag
cgctaccgacaggagtcccttgcgctcgctcagaacctagaacaactgaccgcgaagcag
gccgccgaacaggtgacgttaaccgcgctacgccagcaggaagaaaaagcagagcaggat
ggtagtgagcacaaacgggtacgacagcaacaagagcaggtgatcaacgaacaggttgtg
ccacttgaccatcgcattaccatgctggagcagcaaaaaacgcagcaacaggacgaactg
gcaaaaacgcaggctcgtctgcacgccgatgaaagtaaacaaacacagacagcggcggaa
cagcagcaggctacacagcagcttgaacagatccagtcttaccgccagcaatacgcacat
catcagcagtggggagaacaacttcctctgtggcgcacccagttccgacagttgcgccag
cttcagtatgagcaagagaagctgaagcaaaaacaggcgcagcacaccgcacagtcagca
acattacagcaagaggctgtgacgctggcggcacaacagcgtgaacaacaagcagtcgtt
gatgcagcccgccaacaattcacgcaacacgatgagacacggcaacatcaggaagcccac
cagtcgctttccgccctgcaacagcagtttaatcaacgcattgaccagcgcgctgaacgc
caacggctcgcgacaatcagcgaccagttccagcgtctgcatgtccgcaagcagcagtac
ctcaccaaacagggtgaggtacaagagcatatcagccaatcgcaaatattactgaaacag
cagcagtctgaacatgagcagcgcagccagcatcttgccgatctggaaacgctgcatcgg
caggaagagcatatcgttaagctggaagccgaacgtcaacggctacaggctggcgatcct
tgcccgctatgtggttcaaccgagcatcccgctatcgaacgctatcaggcgctgcaaccg
tctgaaacccaaagccgcctgacagcgctacagcaggaagtgaaccagttaacgacagcg
ctggcgaatacgacggcacagttggcctcgctagagcaacagcgggaacagttgcaacag
gacatcgctcagctcgatagcgaacatcacgccttgctgcaacagtggcaagatgtcagt
gagcgcttacaagttaactacacgctggaacaaccggatgagatcgcagcctggcttacg
caaaatgaagccgaagaacaggctattcgacagcagattaccacacgcgagcaagtgcaa
aaacagtggcaggaaagtaaggatttactgactgccacagaggcattgcagcgggaactc
gaccagaaaatcgcgctcaacacccagcaacaaacttcgctaaacgttacgcagcaagag
accgaacaatcactgcaaaacgtacaccagcaaatcacgcagcacattcaggaaatcacg
caggcgctggcaaatgtggggcttctgctgccggaagctgacgcacaggatgactggcta
actcagcgtgaaagcgaatggcaagactggaaaaccaaagagcaggagcaatctcgctta
gttccgctgttagccacactggaaagcgatcttcagcatctgaatcgcagcgtgaccgag
gcaaaacagcagctccaaacgcagcaacagcagttggaacagcacctcgcgttgctcaac
gcgagccaacaagagcgactggcgctgtttggggataagcagatcgtcgccgtgcgcgaa
caactacagcaaaccagccaacagtatgacgatgcgctccgcctagcccagtcagctcgg
cagcaaaccgaaacgacgttgagccgcctgacaggggagctagcgagcacgcaacagcag
tatgagcagagcacccgcaagcatgagaatgcggccgaccgctttagtcaggccttacag
caaagcacgttcgctgatgaaatgacgttcctcaatgcgctgcttgatgagcaggaacgt
cagacgttgcaggcatggaaggaaaagctgtaccaaagcttgcagcaggcggcggcactt
caccagcaggctgagcgggatctgcttgcccatcaacaaaagcgccccgcctcattgacg
gaagatgccacagaagaagcggtacagcagcagttggcagcactggatgaaacgctgaaa
accaacctgcggcagcagggagagttccagcaccagttagctgacgataaacaacagcgc
cagaaccagcaggatttgctcaatgagatcgcccaaagtcagcaaatgtacgacgactgg
agctgtcttaatacgctcatcggctcacaaagcgggcataaattccgtaagtttgctcag
gggctaacgctggatcatctggtttatctcgctaatctccagctttcccgcctgcatggg
cgctatatgctgaaacggaaacccggcgacgagctggagctgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgtacgctgtccggtggcgagagctttctggtgagt
ttgtcgctggcgttggcgctatccgacctcgtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctcgatgccgagacgctggatatcgcgctggacgcg
ctcgataacctgaacgccgccggtaaaaccatcggcgtcattagccatgttgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaaggttaacggcttaggcgtcagtcgg
ctggcgccgcagtacgccgtttag
DBGET
integrated database retrieval system