Pectobacterium aquaticum: DMB82_0016025
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Entry
DMB82_0016025 CDS
T07653
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00330
Arginine and proline metabolism
paqu00480
Glutathione metabolism
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DMB82_0016025
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DMB82_0016025
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DMB82_0016025
Enzymes [BR:
paqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DMB82_0016025
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Gene cluster
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UEM38643
LinkDB
All DBs
Position
complement(3441210..3443363)
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AA seq
717 aa
AA seq
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MKQLKIAANAAVATRLITTREIVALSQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKELDVLPAGSEWLFLDDDGEHANVLERAAKAYQDTLLPPFFDTLTKYVNMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEDYLRKLIAEVAPERANEPRPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDHDTETIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDAISGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDAAKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELIPIDAAEGRIAAEGALPYPPG
VLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcgaatgcagcggttgccacccgtttaatcacaacgcgc
gagattgtcgcgttgagtcagactgacttcactgatgtggcggcggtcgtggtttctatt
gaggaagcccgtagcggcattctgtcgatattgcagcacaccggttttagcattccggcg
tttgtcgaagagcccgatgaagataaagagttagatgttctgcctgcgggcagcgaatgg
ctgtttcttgatgacgacggcgagcacgccaacgtgctggagcgagcggcgaaagcctat
caggatacgctgctgccaccgtttttcgatacgctgaccaaatacgtcaacatgaaaaac
acgacctttgcctgtccggggcatcagggcggccagttcttccgcaagcacccagcgggg
cgccagttttttgagttttacggtgagaacgtgtttcgttcggacatctgtaatgcggac
gtcaaactgggcgatttgctgatccacgaaggggcggcgaagaaggcgcagaagcacgct
gcgcgcgtgtttaatgccgataaaacctattttgtgttgaacggcacctcctcggcgaac
aaagtggtgacgaacgcgctgctggcgcgcggcgatctggtgctgtttgaccgcaacaac
cataaatccaaccaccacggtgcgctgattcaggcgggcgcgacgccggtttatctggaa
accgtgcgcaacccgttcggctttatcggcggcgtagatgcgcactgttttgatgaagac
tatctgcgcaagctgatcgcggaagtcgcgccggaacgcgccaacgagccgcgcccgttc
cgtctggccgttatccagcttggcacctatgacggcacgatttataacgcgcgtcaggtg
gtcgatagcatcgggcacctgtgcgactacattctgtttgactccgcttgggtcggttat
gagcagtttatcccgatgatggagcagtgttcgccgttgttgctggatctgaatgagaac
gatccggggattttcgtgacgcagtcggtgcataagcagcaggctggcttctcccagacc
tcgcagatccacaagaaagatacgcacatcaaaggtcagcgccgtttctgcaaccataaa
cagctgaataacgcctttatgctgcatgcgtcgaccagcccgttttatccgctgttcgcc
gcgctagacgtcaatgccaaaatgcacgaaggagcaagtgggcgtcggatgtggatggac
tgcgtgaagctgggcattgaagcacgtaagcaactgctgacgcgttgttcgctcatcaaa
ccgttcgtgcctgtgacggtgggcggcgcgctctggcaggatcacgatacggagacgatc
gcgcaggacgtgcgcttcttcaactttgagccgggcgagaaatggcatgcgttcgaaggg
tacgcggaggatcagtattttatcgatccttgcaagttactgctgaccacgccgggtatt
gatgcgattagcggcgattataccgaatttggtattccggcgacgatcctggccaactac
ctgcgcgagcacggcatcatccctgaaaaatgcgacatgaactcgatcctgttcctgcta
acgccagcagaagacgctgcaaaaatgcaggagctggtgaatgcgctggtgcatttcgaa
acgctgatcgcccgcgatgcaccgctgagtgaagtgctgcctagcctgtatcagaaatat
aaagagcgttatcgcggttaccggctgcgtcggctgtgtcaggaaatgcatgatttttat
gctcaacacaacgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgttgccgcaggatgccaacagggaatttgtgcgcgggaatatcgagctgatt
cctatcgacgcagcagaagggcgtatcgcggcagaaggggcattgccttatccgccgggc
gtactgtgtgtcgtgccgggtgaaacttggggcggggcggtacagcgctattttctggcg
ctggaagcgggcattaacctgctgccgggcttttccccagaattgcagggcgtttacagc
gtcgcagaagaagatggcagcaagcgtctgtatggttacgtagtagaagagtaa
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