Pectobacterium aquaticum: DMB82_0016785
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Entry
DMB82_0016785 CDS
T07653
Symbol
ssb1
Name
(GenBank) single-stranded DNA-binding protein SSB1
KO
K03111
single-strand DNA-binding protein
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu03030
DNA replication
paqu03430
Mismatch repair
paqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DMB82_0016785 (ssb1)
03430 Mismatch repair
DMB82_0016785 (ssb1)
03440 Homologous recombination
DMB82_0016785 (ssb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqu03032
]
DMB82_0016785 (ssb1)
03400 DNA repair and recombination proteins [BR:
paqu03400
]
DMB82_0016785 (ssb1)
03029 Mitochondrial biogenesis [BR:
paqu03029
]
DMB82_0016785 (ssb1)
DNA replication proteins [BR:
paqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DMB82_0016785 (ssb1)
DNA repair and recombination proteins [BR:
paqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DMB82_0016785 (ssb1)
TLS (translesion DNA synthesis) factors
Other SOS response factors
DMB82_0016785 (ssb1)
Mitochondrial biogenesis [BR:
paqu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
DMB82_0016785 (ssb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
SSB_1
Motif
Other DBs
NCBI-ProteinID:
UEM38777
LinkDB
All DBs
Position
3602990..3603547
Genome browser
AA seq
185 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVL
FGKLAEVAGEYLRKGSQVYIEGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGG
APAGGNAGGGQQQGGWGQPQQPQGGNQFSGGAQSQQRPAQNHSSTSNAPAQSNEPPMDFD
DDIPF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagaggcgttaataaagtgattcttgtcgggaatctgggtcaagacccggaa
gtccgctatatgccgaatggtggtgcagttgccaacatcacgctggctacgtcggaaagc
tggcgtgacaagcaaaccggtgagcagaaagagaagaccgaatggcaccgtgtcgtgctg
ttcggcaaactggcagaagtcgcgggcgaatacctgcgcaaaggctctcaggtttacatc
gaaggcgcactgcaaacccgtaaatgggccgatcaggctggcgtagagcgctacaccacc
gaagtcgtcgttaacgtcggcggcaccatgcagatgctgggtggacgccagggcggcggc
gcaccagcaggcggtaacgcaggtggcggtcagcaacaaggcggttggggccaacctcag
cagccgcagggcggcaaccagttcagcggcggcgcgcaatctcaacagcgtccagcacag
aaccattcctctacaagcaatgctccagcgcaaagcaacgaaccgccaatggatttcgac
gacgacattccgttttaa
DBGET
integrated database retrieval system
