Pectobacterium aquaticum: DMB82_0018125
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Entry
DMB82_0018125 CDS
T07653
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00071
Fatty acid degradation
paqu00280
Valine, leucine and isoleucine degradation
paqu00310
Lysine degradation
paqu00362
Benzoate degradation
paqu00380
Tryptophan metabolism
paqu00410
beta-Alanine metabolism
paqu00640
Propanoate metabolism
paqu00650
Butanoate metabolism
paqu00907
Pinene, camphor and geraniol degradation
paqu00930
Caprolactam degradation
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01120
Microbial metabolism in diverse environments
paqu01200
Carbon metabolism
paqu01212
Fatty acid metabolism
Module
paqu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DMB82_0018125 (fadB)
00650 Butanoate metabolism
DMB82_0018125 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DMB82_0018125 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DMB82_0018125 (fadB)
00310 Lysine degradation
DMB82_0018125 (fadB)
00380 Tryptophan metabolism
DMB82_0018125 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DMB82_0018125 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DMB82_0018125 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DMB82_0018125 (fadB)
00930 Caprolactam degradation
DMB82_0018125 (fadB)
Enzymes [BR:
paqu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DMB82_0018125 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DMB82_0018125 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DMB82_0018125 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DMB82_0018125 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UEM39019
LinkDB
All DBs
Position
3912077..3914266
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIVELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANRIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATTDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDISAADALK
VGLVQAVVANDKLVPAAIKMLKQAIDGSLDWQAYRRPKLEPLKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETSVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILASIQPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHVSE
KTILASNTSTIPIATLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDNTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFREIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQALMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGHGFYRYQTDGKGKL
RKEQDEAVETLLKDISQPKKAFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSEHYVEMAQQLAHLGAIYQVPDGLQQKAKSNEGYYPSVAPH
ADVSYGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgtcgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcacggttgccagcctgggt
aaggcgctggacgttctggcggaacagccgaacctgaagggcttactgctacgttctgac
aaaccggcattcattgtcggtgccgatattacagaattcctttctctttttgctgcaccg
gccgaaaagctgcatgaatggcttgtcttcgccaaccgcattttcagccgccttgaggat
ttacccgttcccacattgtccgcaattaatagctatgcgttgggcggcgggtgtgagtgc
gtactggcaaccgactttcgtttagcaacgacggatgcacgcattgggctgcctgagacc
aaactggggattatgccgggctttggcggcacggttaggctaccgcgcctgttgggcgcc
gacagcgcgctggagataatcgccgcaggcaaagatattagcgcagccgatgccttaaaa
gtgggactcgtacaggccgttgtcgccaatgacaagctggttcccgctgccatcaagatg
ttaaaacaggcgattgacggctcactggactggcaggcttaccggcgtccgaagcttgaa
ccgctgaagctcaataagattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctgcaaaccgctggcaagcactatccggcaccgatgctagcggtaaaaaccatcgaagcc
gccgcgactatgacgcgcgatgacgcattacagctcgaaacgcagcattttgttcaactg
gcgcgttcaaatgaagctcgcgcactcgttggcattttcctaaacgatcaatatgttaaa
ggcaaagcgaagaaactgattggcgagacatccgtgccgcagcaggccgccgtgctaggt
gcgggcattatgggtggcggcattgcctatcaatccgcgttcaaaggcgtgccaattcgg
atgaaagatatcaatgagaagccgctcgcgctggggatgaatgaggcagccaagctactg
aataagcagatggagcgcggcaagctggacggaatgaaaatggcaacgattctggcgagc
attcagccaacgctggattacgctgggttcgagcgtaccgacatcgtggttgaggccgtg
gttgagaacccgaaaatcaaagccagcgtactcgcggaaacggaatcgcacgtgagcgag
aagacgattctggcttcgaatacctcaaccataccgattgctacactggcagcatcgtta
aaacgaccgcaaaatttctgcggtatgcacttctttaacccagtccaccgcatgccactg
gtcgaaattattcgcggccccaaaaccagcgataacaccatcgccagcgtggtggcttac
gccagtaagatgggcaagacgccgattgttgtgaacgactgccccggattcttcgtgaat
cgggtgctgttcccttactttgctgcgttcagcttattgctcagagatggtgccgatttc
cgcgagatcgataacgtcatggagaaaaaattcggttggccgatgggcccagcctatctg
ctggacgttgtcggtattgataccgctcaccatgctcaggccttgatggctgagggcttc
ccacagcgcatggcgaaagattatcgcgatgcgattgatgtgctgtttgaacaccagcgc
ttcggacagaagaatggtcacggcttctaccgttatcaaaccgatggcaaggggaagttg
cgtaaagaacaggatgaggctgtcgaaacactgcttaaggacatcagccagccgaaaaaa
gcgttcagtgcagaagagattatcgctcgcatgatgatcccgatgattaatgaagtcgcg
cgctgtctggaagaaggtatcgtcgctagccccgccgaagcggacatggcgctggtatac
gggttaggtttccctcccttccacggcggagcttgccgctatctggatacactaggcagc
gaacactacgtcgagatggcgcaacaattggcgcacctcggtgcaatctatcaggtgcct
gacggcttgcagcaaaaagccaaaagtaatgaaggctattacccatcggtcgcgccacac
gcggacgtttcttacggccaaccggcatga
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