KEGG   Pectobacterium aquaticum: DMB82_0018675
Entry
DMB82_0018675     CDS       T07653                                 
Symbol
hofQ
Name
(GenBank) DNA uptake porin HofQ
  KO
K02507  protein transport protein HofQ
Organism
paqu  Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:paqu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paqu02044]
    DMB82_0018675 (hofQ)
Secretion system [BR:paqu02044]
 Type II secretion system
  Type IVa pilus homolog protein
   DMB82_0018675 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN DUF8446 type_II_gspD_N0
Other DBs
NCBI-ProteinID: UEM39113
LinkDB
Position
complement(4007861..4009135)
AA seq 424 aa
MNMNKLCRLVAWSGLLLLAAPFQASAESSVSMAFEDSPISRVLQALADHQQLNVVIAPGV
TGNLSLRLADIPWQQALDIVLRMGKLSVERNGNVLMVFPAGHLESLQKERDEHTAEQAQK
LPLHNISVALQYADSTDVAASVQAQRGTLLSTRGSVTVDKRTNTLLIRDTEEALAQLEPW
VKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGDVANKALRLNHFNVGLPVDTPAI
NAGFHLARLNGRLLDLELMALEQESQVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGAS
GSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQEIQTQ
VTVADGETIVLGGIFQQQKKNSDRQVPILGEVPVFGHLFRNHTQQHTRRELVIFITPTLI
PVSS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaatatgaataagttatgtcgattggtggcgtggagcgggttacttcttctcgccgcg
ccgtttcaggccagtgcggaaagttcggtatcgatggcgtttgaagactcaccgatatcg
cgagtgctacaggcgttagcggatcaccagcaactcaatgtggtgatcgcgccgggggtg
acggggaaccttagcctgaggctggcagatattccctggcagcaggcactggatattgtg
ttacgcatggggaaacttagcgtcgagcgtaacggcaacgtactgatggttttccctgcc
gggcaccttgagtccttgcagaaagaacgggacgaacacacagcggaacaggcgcagaaa
ttgccgctgcataatatctctgttgcattgcagtatgctgattcaacggacgtggcggcc
agcgttcaggctcagcgtgggacgctgctgtctacgcgtggcagcgtaaccgtggataaa
cgaacgaataccttattgattcgcgatacggaagaggctctggcacagctcgaaccgtgg
gtgaaggagcttgatctacccttagcacaggtacagctggcggcgcatatcgtcactatc
agcagcgagcacctgcaagcgttgggcgtaaactggggactgggagaaggggacgtggcg
aacaaggcgctcaggctgaatcattttaacgttggcctgccagtggatacgccagcgatc
aatgccgggttccatttggcgcgactgaatggccgcctgctggatctggagttaatggcg
ctggaacaggaaagtcaggtcgagattatcgccagccctcgcttgtttactgcgcaccag
cagaccgccagtattaaacaaggcacggaaattccgtatcaggtttccagcggtgccagc
ggatcgacgtctatcgagttcaaagaagcggtattagggatggaagtgacgccggacatt
ctgcgtgctgggcggattacgctgaacctgaaaatcagccaaaacatgccggggcagacg
attaagcagggcgataatggcgaagcgttagcgatcgataaacaggaaatccaaacccag
gtgacagtcgctgatggtgaaaccatcgttttaggcggcattttccagcagcaaaaaaag
aacagtgacagacaggtgccaatattaggtgaggttcccgtatttggtcatctgttcaga
aaccatactcagcagcatacgcgacgagaattggtcattttcattacgccgacgctgata
cccgtgtcatcatga

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