Pectobacterium aquaticum: DMB82_0018765
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Entry
DMB82_0018765 CDS
T07653
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00300
Lysine biosynthesis
paqu00470
D-Amino acid metabolism
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01120
Microbial metabolism in diverse environments
paqu01230
Biosynthesis of amino acids
Module
paqu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DMB82_0018765
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMB82_0018765
Enzymes [BR:
paqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DMB82_0018765
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UEM39131
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All DBs
Position
complement(4029045..4030448)
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AA seq
467 aa
AA seq
DB search
MSNLFSFAAVSSLPVAQAHWPERLTPYLDSEIEQFVFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAVLRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLTALVHHRALIVLDSLEEFDEVLALADLLRVTEPVRVLLRYRP
SFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYEPETRVAAFAEVLPLLERA
RSKGLQPAIIDIGGGLPIQYLSASRYQDYLVKQNGADYRHGQVPTSFYPYGGERSAVDYL
EAFLSASIGQDRVADVLKQHDLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTPPTPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
PGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttccctccctgtcgcgcaggcccactgg
cctgagagactgacgccttatctggatagtgagattgagcagtttgttttcaactcgccg
caaaggctgtcatggttggttgagcagtatggatcgccgctgaatattgtctggccgcac
accgtagccaacaatatcgcggtattgcggacagtgttgcagcgtcacgacgtggactgc
cgcctgtattacggcgcgaaggtgaacaagtcgccgggtttagttcaggcggcggttaac
gcgggcgtcggcgtggatgtttccagcttacaggagctgaaagatgcgctgcgggcaggc
tgtgacggcgcgcggctgtgcgccaccggtccggccaaaacgcgtgagttcctgacggcg
ctggttcatcatcgcgcgcttatcgtgctggattcactggaagaattcgacgaggtgctc
gcgctggcggatttactacgcgtgacggagcccgtgcgggttctgctgcgctatcgcccg
tcgttcgcgcaggccagtcggtttggcatgctggccgatgaggttgcaatctgtctggag
gcgttgagcaccagacaggctgtgcttcatctggaaggcttccatttccatctcggcggc
tatgagcctgagactcgcgtggcggcatttgctgaggtactgccattactggagcgggca
cgctcaaagggattgcagcccgcgattattgatatcggcggaggattgccgattcaatat
ctttcggcttcacgctatcaggattatttagtgaagcagaatggggcggattaccgccac
ggtcaggtgccgacctcgttttacccgtatggcggcgagcgttcggcagtcgactatctt
gaggcattcctgtccgcctcaattggacaggatcgcgtagcggacgtgctcaagcagcat
gacctgattctggcgatagagccgggacgcagtctcgctgaccaaagtgcgattaccgtg
tttcgcgtcacgcgcacgcgccgccagccggatggcaaccacgtcgtgtttgtggaaggc
agcagctttagcgcgtgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacacctccgacgccgggcaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
cctggcgacttactgatttacgcgaatacggcgggataccagatggacctgctggaaaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgcgtttaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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