Pectobacterium aquaticum: DMB82_0019230
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Entry
DMB82_0019230 CDS
T07653
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00521
Streptomycin biosynthesis
paqu00523
Polyketide sugar unit biosynthesis
paqu00525
Acarbose and validamycin biosynthesis
paqu00541
Biosynthesis of various nucleotide sugars
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01250
Biosynthesis of nucleotide sugars
Module
paqu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
paqu_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DMB82_0019230 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DMB82_0019230 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
DMB82_0019230 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DMB82_0019230 (rffG)
00525 Acarbose and validamycin biosynthesis
DMB82_0019230 (rffG)
Enzymes [BR:
paqu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DMB82_0019230 (rffG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
UEM39216
LinkDB
All DBs
Position
complement(4136757..4137830)
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AA seq
357 aa
AA seq
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MALKRILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQV
DICDRAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQN
LADADKRAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTY
GFPTVITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYK
VVTEGEIGETYNIGGHNERKNIEVVQTICALLEELAPKKPAGVEHYRDLITYVKDRPGHD
MRYAIDAGKIERELGWRPEETFETGMRKTVSWYLNNEKWWRSVQDGSYTGERLGLSD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaaacgtattttaattaccggtggtgcaggatttattggttcggcgttggtc
agatacattctgacggaaacgcaggacagcgtcgttgttgttgataagctgacctatgcg
ggcaacctgtcatcgctggctcccgttgctgatagctcacgcttcgcgttcgagcaggtg
gatatctgcgatcgtgctgaattggaccgtgtctttacggcttaccagcctgcgctagtg
atgcatctggcggcagaaagccacgtcgatcgctctatcgatggccctgcggcgtttatc
gaaaccaatattgtcggcacctataccatgctggaagcggcacgccactactggcagaac
ctggctgatgccgataagcgtgcgttccgttttcaccatatctccaccgatgaagtgttt
ggtgacctgcacgggacggacgatctgtttacagaaaccacgccttatgcaccaagtagc
ccttattccgcatcgaaagcctccagcgaccaccttgttcgcgcctggctgcgcacctac
gggttcccgacggttatcaccaactgctcgaataactacggtccttaccatttccctgag
aagctgattccgctggtgatcctgaatgcggtcgcgggcaaaccgttaccggtttacggt
gacggtgcgcaaatccgcgattggctgtttgtcgaagatcacgctcgcgcactgtacaaa
gtggtgacagaaggcgaaatcggcgaaacgtacaacatcggcggccacaacgaacggaaa
aacattgaagtcgtgcagaccatttgtgcgttgctagaagaactggcgccgaagaaaccc
gctggtgtggaacattaccgcgatctcatcacctacgtgaaagaccgccccggtcacgat
atgcgttacgcgatcgatgccgggaaaattgaacgtgagctgggctggcgtccagaagaa
acgtttgagacgggcatgagaaaaaccgtcagttggtatctgaataatgaaaaatggtgg
cgcagcgtgcaggatggttcttataccggcgaacgtttagggttgagcgactaa
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