Pectobacterium aquaticum: DMB82_0019675
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Entry
DMB82_0019675 CDS
T07653
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paqu03000
]
DMB82_0019675 (slmA)
03036 Chromosome and associated proteins [BR:
paqu03036
]
DMB82_0019675 (slmA)
Transcription factors [BR:
paqu03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DMB82_0019675 (slmA)
Chromosome and associated proteins [BR:
paqu03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
DMB82_0019675 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
WAPL
HTH_11
DUF6262
Motif
Other DBs
NCBI-ProteinID:
UEM39301
LinkDB
All DBs
Position
4239059..4239655
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AA seq
198 aa
AA seq
DB search
MAEKENTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
SLIEFIEDSLTTRINLILQDEKETFNRLRLILLLILGFAERNPGLTRIMTGHALMFEQDR
LQGRINQLFERIESQLRQVLREHKLRDGKGFQHDETLLASQLLAFCEGMLSRFIRSEFRY
RPTQEFDTRWPLLAAQLN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagaaaatacgaaaaggaatcgccgcgaggaaattttgcaggcgctggcg
cagatgctggaatccagcgacggtagccaacgtatcaccacggcaaaattagctgcgaac
gtcggcgtgtccgaagcggcgctctaccggcatttccccagtaaaacgcggatgtttgat
agcctgattgaatttattgaggatagcctgaccacccgcattaacctgattctgcaagac
gaaaaagaaacgtttaatcgtcttcgtctgattttgctgcttattttagggtttgcggaa
cgaaatccgggtctgactcgcatcatgaccggccatgcgctgatgtttgaacaggatcgc
ttgcaggggcggattaaccagctatttgagcgtattgaatcgcaactgcgtcaggtgttg
cgcgagcacaagctacgcgatggcaaaggtttccagcatgatgaaacgctgctagccagc
caactattagcattttgcgaagggatgttgtcgcgcttcattcgctctgaattccgctat
cgtccgacgcaggaattcgacacccgttggccgctgttggcagcacagctgaactaa
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