Pectobacterium aquaticum: DMB82_0020020
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Entry
DMB82_0020020 CDS
T07653
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DMB82_0020020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paqu02000
]
DMB82_0020020
Transporters [BR:
paqu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DMB82_0020020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM39360
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All DBs
Position
4311916..4313553
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AA seq
545 aa
AA seq
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MATFLHPHQKLTIFTSLLLLGGALGAQAANDAPKIGGTLIYLEQQAHTNLYTPAGGFYPN
GGILNQITDKLTYQNPETLEVEPWIAESWTINADNTEYTFKIRPGVSFSDGTPLDANAVA
KNIDTYGLGNTALNQPISEVINNYLRSEVIDPLTVKFYFKKPSPGFLQGTATIGSGLVSL
STLERNFNQLGNAKNIIGSGPFVVSSEKLGRELKLSARKDYNWAPVKSKHQGRAYLDGIT
YLVTPEDSVRIGALVSGQADFIRQIQAYDEKRVQSQGFNLYAPPTRGVNNSVVFRPDNPL
VADIRVRKALLHATNTKEIIDTLFSDNYPQATSPLAKTAAGYVDLSSKLTFDPAQANKLL
DEAGWKTGSQGLRQKDGKTLELTAYESLPQPQNKETLQLVSQQWAKVGVKLNVLAGDAGS
KTVDSLDPLKTGVAPAMVGRADPDVLKSQYYPTVRNVLLQKGGSSDKVNTFVDAHLNTLL
DGIAAETDRSKRLALVGEVQSYLIDQAYVIPIFEEPQVFAGAPTTKGIAFEAVGRPSFYN
TWLDK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttttttgcatcctcatcagaaactcactatttttacctcattgctccttctg
ggtggtgcgctgggcgcacaggcagcgaacgacgcgccgaaaatcggcggcacgctgatt
tatctggagcagcaggcgcacaccaatctctatacgcccgcgggcgggttttatccgaac
ggcggcatcctcaaccagatcaccgataaactgacgtaccagaacccagaaacgctggag
gtcgaaccgtggattgcggaatcctggaccattaacgcggataacaccgaatacacgttc
aagattcgtcccggcgttagcttctctgacggcaccccgctggatgccaacgcagtagcg
aaaaacatcgatacctacggcttgggaaatacggcactcaaccagccgatttctgaggtc
atcaataactacctgcgcagtgaagtcatcgatccgctcacggtgaagttttactttaag
aagccgtctccgggctttctgcaaggtactgcgaccatcggttccggtctggtgtccctc
agtacgctggagcgcaatttcaatcagttaggcaatgctaaaaacattattggctccggc
ccgttcgtggtgagcagcgagaagctagggcgggaactgaaactgtccgcccgtaaggat
tacaactgggcaccggttaaatcgaagcatcaggggcgcgcctatctggacggtattacc
tatctggtcaccccagaagacagcgtgcgtattggcgcgctggtatcgggtcaggcggac
ttcattcgtcagatccaagcctatgatgagaagcgggtgcagagccagggcttcaatctt
tatgccccaccgacacgcggcgtcaataacagcgtcgtattccgcccggataacccactg
gtcgccgatattcgcgtgcgtaaagcgctgctgcacgccaccaacaccaaagagatcatt
gatacgctgttctcggacaactacccacaggccacgtcaccgctggctaaaaccgccgcg
ggctatgtcgatctctccagcaaactcacgttcgatcccgctcaggccaacaaactgtta
gatgaagcaggctggaaaaccggttcgcagggattgcgacagaaagacggcaaaacgctg
gagctaaccgcctatgaatccctgccgcagccgcagaacaaagaaaccttacagctggtt
tctcagcagtgggcaaaagtcggcgtgaagctgaacgtgctggcgggtgacgcaggcagc
aagaccgtcgatagcctcgatccgctgaaaacgggcgttgctccagcgatggtaggccgt
gccgacccggatgtactgaaaagccaatattacccgacggtacgcaacgtcctgctgcaa
aaaggcggctccagcgacaaggtgaacacctttgtcgatgcgcacctaaatacgctgctg
gatggcatcgccgctgaaaccgaccgcagcaagcgactggcgctggtcggagaggtgcag
agctacctgatcgatcaggcctacgtcattcctatttttgaagagccgcaggtgtttgcg
ggcgcgccaaccacaaaaggcatcgcgtttgaagccgttggtcgccccagcttttacaac
acctggctggataagtaa
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