Pectobacterium aquaticum: DMB82_0020105
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Entry
DMB82_0020105 CDS
T07653
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DMB82_0020105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqu03021
]
DMB82_0020105
Transcription machinery [BR:
paqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMB82_0020105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
Fe_dep_repress
HTH_24
HTH_29
HTH_Mga
HTH_10
HTH_31
PAX
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UEM39375
LinkDB
All DBs
Position
complement(4327355..4327867)
Genome browser
AA seq
170 aa
AA seq
DB search
MVRKATASVNDFAQQLYFDHHRWLCNWLRHKLDCAQHAEDLAQDTFLSVLMNPELLTIRQ
PRPFLATVARRLVANHYRRKKIEDAYLDVLSTQPDACMPSPETRLLTLEILEQLDAALDG
LPAPVREAFLLAHLHGMRYSDIAERLRVSSSSVKQYLQRANLQCFFALPL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaagcgacggccagcgttaatgactttgcccaacagctctatttcgatcac
caccgctggctgtgtaactggctgcgccataaactggactgcgcccagcatgcggaagac
ctggcacaagatacgttccttagcgtgctgatgaacccggaactgctcacgattcgccag
ccgcgcccgtttctggctaccgtggcccgccgtttggtcgccaatcattatcgtcgtaaa
aagattgaagatgcctatctggatgtcttgagcacgcagccggatgcctgtatgccctct
ccggaaacgcgtctgcttaccctcgaaattcttgaacagcttgatgccgcattggatggc
ctgccagcaccggtcagagaagcgtttttgctggcgcacctccacggcatgcgctatagc
gatatcgccgaacgcttacgggtttccagcagttcggtgaaacagtatctgcaacgcgcc
aacctccagtgtttctttgcgctgccgctatga
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integrated database retrieval system
