Pectobacterium aquaticum: DMB82_0020230
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Entry
DMB82_0020230 CDS
T07653
Name
(GenBank) 3-hydroxy-3-methylglutaryl-CoA lyase
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00360
Phenylalanine metabolism
paqu00362
Benzoate degradation
paqu00621
Dioxin degradation
paqu00622
Xylene degradation
paqu01100
Metabolic pathways
paqu01120
Microbial metabolism in diverse environments
paqu01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
DMB82_0020230
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DMB82_0020230
00622 Xylene degradation
DMB82_0020230
00621 Dioxin degradation
DMB82_0020230
Enzymes [BR:
paqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
DMB82_0020230
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
EF-hand_8
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
UEM39397
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Position
4357896..4358843
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AA seq
315 aa
AA seq
DB search
MKNSLEIIDVTLRDGGYVNSFHFSEDDVQSIVYHLDKARVNYIELGYLKGSPFDIKNCGL
TSDITPDLFKRLRALPKQAKLGVMAHPKNVDGEDISRLVDVGLDLIRICITPQNIEQALK
LITWSKKQNLKVCANFVRMSRFRLKEVIDNMRLCEESGADIIYSADSLGNMQPKDVTVLI
AGMKALLAKNIGFHPHDNLGLAGINALTAIKAGAKIIDGSLLGMGKGGGNLRTEVIAHLL
KDNQANLNLDLDIDSLIEAASYVSKYLNKKNNKGGNLFQSYLAMKNMTVEEGDVIYSNAL
LNHSGSWVERIAESI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcactggaaattatcgatgtcacactgcgagatggtggttacgttaatagc
tttcacttttctgaggacgatgtacagagcatcgtttatcatctggataaagcgcgagtt
aactatattgagttaggctatttaaaaggttcaccgtttgatattaaaaactgtggccta
acctcagatattacgccagacctttttaaacggctgagagccttgccgaaacaggcgaag
ttgggggtaatggctcatccaaaaaatgttgacggcgaggatatttcgcgacttgtcgat
gtcggtctggacttaattcgtatctgtattacgccgcagaatattgagcaagcactgaaa
cttatcacctggagcaaaaagcagaacctgaaagtttgtgccaactttgttcgtatgagc
cgttttcggctgaaagaggtgatcgataatatgcgactgtgcgaggaaagtggcgcggac
attatttattctgctgattcgctaggtaatatgcagccgaaagatgtcactgttctgatc
gcgggcatgaaagccttgttggccaaaaatatcggttttcatcctcatgataacctaggg
cttgctggtattaatgctctgacggcgattaaagctggtgctaaaattatcgacggctct
ttacttggtatggggaaaggcggcgggaatttacgaactgaagtaatcgctcatctttta
aaagataatcaggccaatctgaatcttgatttggatatcgactccttaatcgaagcagcc
agctatgtgagtaaatatctgaataaaaagaataataagggcgggaatttatttcagtct
tatttggctatgaaaaatatgacggtagaagaaggcgacgttatttacagtaatgcgcta
ttgaaccattcaggaagttgggtggaaaggattgccgaaagtatctga
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