Pectobacterium aquaticum: DMB82_0020360
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Entry
DMB82_0020360 CDS
T07653
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu03030
DNA replication
paqu03410
Base excision repair
paqu03420
Nucleotide excision repair
paqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DMB82_0020360 (polA)
03410 Base excision repair
DMB82_0020360 (polA)
03420 Nucleotide excision repair
DMB82_0020360 (polA)
03440 Homologous recombination
DMB82_0020360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqu03032
]
DMB82_0020360 (polA)
03400 DNA repair and recombination proteins [BR:
paqu03400
]
DMB82_0020360 (polA)
Enzymes [BR:
paqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DMB82_0020360 (polA)
DNA replication proteins [BR:
paqu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DMB82_0020360 (polA)
DNA repair and recombination proteins [BR:
paqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DMB82_0020360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMB82_0020360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UEM39422
LinkDB
All DBs
Position
complement(4386549..4389338)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
EVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDVESGTWMQGR
KSSQPVQAVSNAVVEQVAEEDNAPTLSADGYVTILDEKTLLDWIERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLSHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTIRLAELETQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGVDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDTPKVKMIMQVHDELVFEIHDSVIEESISK
IKALMEGCMQLNVPLQVDIGTGMNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaatcctttaatactggtagacggttcatcctatttgtatcgt
gcttatcacgctttcccaccgttaacaaacagcgcgggagaagccaccggtgcaatgtat
ggcgtactgaatatgctacgtagtttgctgttgcaatatcagcctagccacgttgccgtc
gtttttgatgcgaaaggaaaaacgtttcgcgatgaactgttcgaaaattataaggctcac
cgcccaccgatgccggaggatctacgcgagcaaatagagcctctgcataagatggtgaaa
gcgatggggcttccgcttctggcggtttccggcgtagaagcggacgatgttattggtacg
ctcgccgttcaggcggaaaaagcgggtaagtcggtgctgattagtaccggcgataaagat
atggcgcaactggtgacgccgagcgtgacgctcatcaataccatgaataactcgattctt
ggcccacaggaagtgtgtgataagtacggtattcctcctgagctgattatcgatttcctt
gcgctgatgggagatgcatcggataacattcccggtgtacctggcgtgggtgaaaaaacg
gctcaagcgctattgcaagggctcggcgggctggattcgctctatgccaatcttgataaa
attgccgggctttccttccgtggtgcgaaaaccatggcaccgaagctggaacagcacaaa
gaagtggcctacctctcttatcagctggccaccattaaaacggatgtcgagctggagctt
agctgcgatcagctcaccgttaacgagctggatgtagatgagctacatcgtcttttttcc
cgttatgaatttaaacgctggttatcagatgttgaatcaggcacctggatgcaaggtaga
aagagcagccagcctgttcaggcggtgagtaacgcggtggttgagcaagttgctgaagaa
gataacgcgcctacgctttctgccgacggttatgtcacgattcttgatgaaaaaacgctg
ctggactggattgagcgtttaaaacaggctgaggttttcgcttttgatacggaaaccgac
gggctggatacgctcaccgccaatctgattggtctgtcatttgcgattaagccaggtgaa
gcggcttatctgccgttggcacatgactatctggatgcaccggaacagttggatcgcacc
aaggtattggccttgttcaaaccgctgctggaagatgagaagctgcttaagattggccag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttatgtgctagacagcgtggcgggccgccacgatatggat
agcctagccgaacgctatctgagccacaaaaccattacctttgaagagatcgcgggtaag
ggaaaaaatcagctgacgtttaatcagattgcgctggaacaggctgggccttatgccgcc
gaggacgcggacgttacgctgcatctgcaccagaagctctgggggaaactccagccgcat
gccgatctgtgccaagtcttccagactatcgatatgccgctggtgccggttttatcccgc
attgagcgtacgggcgtgcttatcgatcctgctatcctcgcggaacactcaaaagagctc
acaattcgtctggcagagttggaaacacaagcctatgagctggcgggcgaagagttcaac
ctctcatcgaccaagcagctacaggggattttgtatgaaaaacaaaagctgccgattctg
aagaaaacgccaaaaggcgcaccgtcaaccaatgaagaagtgttggctgaactggcgctg
gattaccctctgccgaagctgatcttggaatatcgtgggttggccaagctgaaatctact
tacaccgataagctgccgctgatgatcaatccggcgacgaagcgtgttcatacgtcttat
catcaggctgttaccgcaactgggcgtttgtcttccagcgatccgaacctgcaaaatatc
ccggtgcgtaatgacgaagggcgccgtattcgtcaggcattcattgcaccgaagggctac
agcattgttgcggcggattactcgcaaatcgaactgcgtatcatggcgcacttatccggt
gataaagggctgttgaacgcgtttgctaacggggtggatatccaccgggcaacggcgtca
gaagtgtttggcatcgccttggataaggtgacatcagaacagcgccgcagtgcgaaagcg
atcaactttggtctgatctacggcatgagcgcatttggcctgtcgcgtcagttgaatatt
ccgcgtagcgaatcgcagaagtacatgaacctgtattttgagcgttaccccggtgtgcag
gattacatggagcggacgcgtcaacaggctgctgagcatggctatgtgtccacgcttgac
ggtcgccgtctctatctgcctgatatccattctcgtaatgcgatggcgcgtaaaggcgcg
gaacgtgcggcgattaacgcaccaatgcagggcactgctgctgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacacgccgaaggtgaagatgatcatgcag
gttcacgatgaattggttttcgagattcatgattcggttattgaggaatccattagtaaa
atcaaagcattaatggaaggctgtatgcaattgaatgttccgttacaggtagacattggt
acgggcatgaactgggatgaagcacattaa
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