Psychrobacter arcticus: Psyc_0071
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Entry
Psyc_0071 CDS
T00256
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
par
Psychrobacter arcticus
Brite
KEGG Orthology (KO) [BR:
par00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
par03016
]
Psyc_0071 (truB)
Enzymes [BR:
par01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Psyc_0071 (truB)
Transfer RNA biogenesis [BR:
par03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Psyc_0071 (truB)
Prokaryotic type
Psyc_0071 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
NOA36
Cwf_Cwc_15
DKCLD
DUF2457
Piezo_TM1-24
PPP4R2
DNA_pol_phi
Motif
Other DBs
NCBI-ProteinID:
AAZ17945
UniProt:
Q4FVL3
LinkDB
All DBs
Position
81008..82150
Genome browser
AA seq
380 aa
AA seq
DB search
MSIASTQADKKSSNHPDKIKISGVILVDKPQGMTSQQVVSKVKYLFKSPNHDSKKAGHTG
TLDPMATGLLPICLGEATKFSHYQLDADKSYQATILLGSQTDTGDADGQVTAEATISAFD
DTMLDKIAQQFLGAQQQIPPMYSALKKDGKKLYEYARAGIEVDRPPRDIILKAIELKAID
EQQIQLTVTCSKGTYVRVLAEDIAKAIGTLGHLTALSRLQVGDFKIDETITLANLEALAL
EQRQTYLLPVDACIDINAELTLSSEQCERVQMGQRLNVIDQLTNDLQSYITSAIEQHLST
SNKNAAVNQNVEDDNDDNDDNDDNDDNDDNDDNDDNDDNAQQLLHEIPVDIRLIDEHGTF
IGLGAVSLNGRLQPKKLIQL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgcatctacgcaagcggataaaaagtctagtaatcaccctgacaagattaaa
atttcgggtgttattttagtcgataagcctcaaggtatgacttcacagcaagtggtgtca
aaggtaaaatatttattcaaatcgcctaaccatgacagcaaaaaagcaggtcataccgga
acacttgatccgatggcaacggggttgttgcctatctgtttgggtgaagcgactaagttc
agtcactatcagcttgatgcggataaatcttatcaagcgactattttacttggtagtcaa
actgataccggtgatgctgatggacaagtcactgctgaggcaacgatttcagcgtttgat
gatacaatgttagacaaaattgcccagcagtttctaggtgcccagcagcaaattccaccg
atgtattctgccttaaaaaaagatggcaaaaaactctatgaatatgctcgtgctggtatt
gaagtagaccgccctccaagagatattatcctcaaagccattgagttgaaagcaatcgat
gagcagcaaatacaattgacagtcacctgttcaaaaggcacttatgtgcgtgtgttggca
gaagatattgccaaagccataggtacacttgggcatttgacggcactgagccgtttacaa
gtgggtgattttaaaatcgatgagacaattacgcttgcaaatttagaggcgttggcatta
gaacaacgtcagacatatctattgccagtagatgcctgcatcgatattaatgctgagctt
acattatcatcagagcagtgtgagcgtgtgcaaatgggtcaacgtttgaatgttatcgat
cagttgactaatgatttgcaaagttatattacatcagctatcgaacagcacttatctact
agcaataaaaacgctgctgttaatcaaaatgttgaagatgataacgatgataacgatgat
aacgatgataacgatgataacgatgataacgatgataacgatgataacgatgataacgcg
cagcaattgctacatgagataccggtagatattcgtcttatcgatgagcatggaacgttt
atcggtctaggggcagtgagcttaaatggtcgattgcaacctaaaaaattgattcagtta
taa
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