Psychrobacter arcticus: Psyc_0074
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Entry
Psyc_0074 CDS
T00256
Symbol
pnp
Name
(GenBank) putative polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
par
Psychrobacter arcticus
Pathway
par03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psyc_0074 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
par03019
]
Psyc_0074 (pnp)
03016 Transfer RNA biogenesis [BR:
par03016
]
Psyc_0074 (pnp)
Enzymes [BR:
par01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Psyc_0074 (pnp)
Messenger RNA biogenesis [BR:
par03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Psyc_0074 (pnp)
Transfer RNA biogenesis [BR:
par03016
]
Prokaryotic type
tRNA degradation factors
Psyc_0074 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
KH_N4BP1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AAZ17948
UniProt:
Q4FVL0
LinkDB
All DBs
Position
83907..86009
Genome browser
AA seq
700 aa
AA seq
DB search
MTMFNTIKREFQYGNQQVVIETGRIARQANSILVHMGGVTVLVAAVVKSDAKEGQNFFPL
TVNYQEKMYAAGKIPGAYGKREGRASESETLTSRLIDRPIRPLFPEGYVNEIQITATVVS
SDKTQSADIAALIGASAALAISDAPFNGPVAAARVGFINGEYVLNPTLEELKESDLDLVV
AGTKSAVLMVESEAAELSEDQMLGAVLYGHQQQQIVIDNIASMAAEIGTAKQQYTAPVRD
QALETGMKEQFGAQVSDAYTITDKQARYSKLNEIKDAAIVALAGDAESESYSDTVSELKE
IYNDLKYRTVRDNILSGKPRIDGRDLETVRALDVQVGVLPFTHGSALFTRGETQALVTTT
LGNTRDVNMIDSLAGTIRDHFMLHYNFPHFSVGETGREGIPKRREIGHGRLARRGVQAML
PDSDRFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAPVAGIAMGLVKEGERF
AVLSDILGDEDHLGDMDFKVAGSKDGITALQMDIKIEGITPDIMEQALKQAHAGRIHILD
AMNKVLPESRTEINAHAPNYAVIEINPDKIRDVIGKGGATIRQLTEETGAVIDIDDAGTI
RIFGENKAATKAAIAKIEAITAEVEVGKTYEGTVARIVDFGAFVNVLPNTDGLVHISQIA
DERVENVSDYLKEGQIVKVLVQDVDNRGRIKLTMKGIEQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtttaataccattaagcgtgaatttcaatacggcaaccagcaagttgtcatc
gaaacagggcgtattgctcgccaagcaaactctattttagtacacatgggcggcgttact
gtgttggtagcagcggttgtaaagtctgatgccaaagaaggtcaaaacttctttccattg
actgtcaactaccaagaaaaaatgtacgctgcaggtaaaattccaggtgcttatggcaag
cgtgaaggtcgtgcaagcgagtctgaaaccttaacgtcgcgtctgattgaccgcccaatc
cgtccgctattccctgaaggctatgtaaacgagattcaaatcacagcgacggttgtatca
tctgataaaactcaatcagcagatatcgcagcattaatcggtgcttcagcggcgctagct
atctctgatgccccattcaatggtcctgttgctgccgcccgtgttggttttatcaatggt
gagtacgtactgaaccctactcttgaagagcttaaagaaagtgatcttgatttggtcgtg
gctggtacaaagtctgccgtattgatggttgaatctgaagctgcagagttatcagaagat
caaatgctaggcgcagtattatacggtcatcagcagcagcaaatcgttatcgataacatt
gcctcaatggcagcagaaattggtactgctaagcagcaatataccgctcctgtacgtgat
caagcgttagagactggtatgaaagagcagtttggtgcgcaagtatctgatgcttatacg
attactgataagcaagctcgctacagcaagcttaacgaaattaaagacgccgctattgta
gcccttgctggcgatgctgaatcagaaagctatagtgatacagtatctgagttaaaagag
atttataacgatctaaaatatcgtaccgttcgtgacaatattttgtctggtaagccacgt
attgatggtcgtgatttagagaccgttcgtgctcttgatgtacaggttggtgtactacca
tttactcatggttcagcactgtttacacgtggtgaaacccaagccttggtaacgactacc
cttggtaatactcgtgacgtcaatatgattgactcgctagcgggtacgattcgtgaccat
ttcatgttgcattacaactttccgcatttctcagtaggcgaaacgggtcgtgaaggtatt
cctaaacgtcgcgaaattggtcatggtcgtctagcacgccgtggtgtacaagcgatgctg
cctgatagcgaccgcttcccgtatgtcatccgtgtggtatctgagatcactgaatcaaac
ggttcatcatcaatggcttctgtttgcggcgcgagcttggcattgatggacgctggtgta
ccaattaaagcaccagttgctggtatcgccatgggtctggtcaaagaaggcgagcgtttc
gcggtattgtctgacatcttaggtgatgaagatcatcttggcgatatggattttaaagtt
gctggttctaaagatggtattactgccctgcagatggatattaaaattgaaggtattaca
ccagatatcatggagcaagcgttaaaacaagcccatgctggtcgtattcatatcctagac
gcgatgaacaaagtattgcctgagagccgtactgaaatcaatgctcatgcgcctaattat
gcagtaattgagatcaatccagacaaaatccgtgacgttatcggtaaaggtggcgcgacg
attcgtcagctaactgaagaaactggtgcggttattgatatcgatgatgcgggtactatt
cgtatctttggtgaaaacaaagcggcaactaaagcagcgattgctaaaatcgaagcaatc
acggcagaagttgaagtgggtaaaacctatgaaggtacggtcgctcgtatcgtcgacttc
ggtgcttttgttaacgtattaccaaatactgatggcctcgtccatatctcacaaatcgct
gatgagcgcgtagaaaacgtttctgactatctaaaagaaggtcaaatcgtgaaagtactg
gtacaagacgttgataatcgtggtcgtatcaagttgactatgaaaggtattgagcaaagc
taa
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