Psychrobacter arcticus: Psyc_0203
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Entry
Psyc_0203 CDS
T00256
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
par
Psychrobacter arcticus
Pathway
par02020
Two-component system
par02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
par00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psyc_0203 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Psyc_0203 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
par03021
]
Psyc_0203 (rpoN)
Transcription machinery [BR:
par03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psyc_0203 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
UBA2_UBAP-1
Motif
Other DBs
NCBI-ProteinID:
AAZ18076
UniProt:
Q4FV82
LinkDB
All DBs
Position
242863..244572
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AA seq
569 aa
AA seq
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MSMSFGLATTLSISQKLTPQMQQAIKLLQLSSLELAQEVQAKLDSNPLLERIEDDEDEYE
SADKSADKDALVEFGEPLTLDSWNQNTASDTFSVSSSSNNEDEFEYDDSISDSLDKLQQD
SFDTDAIDSYMLEDFDGSNEESLNYDSPYAEYDGFDTASAGTGSPSARPDSDDFDSYQGS
TNATIQDHVRWQLNFKRLSETDTLIAEYLMDSMDDMGFVRLDIEELLQSFDTIASFYQWD
ERVEHDEVMAVLRMIQSCDPLGVGARNLSECLAIQLSKLDTDIPYLKQAQALLSASEHLV
SNNIKALTERTGLAAQEITPALMLLRSLNPSPGLLFQSRQPDYTQSPDSYDIPDVLVTPI
RRHDANQNTDTSTQEDGWQVRLNPETLPKLRVNQEYANLVKRGDNSPDNQYLRENLTDAR
LFIRSIEERNQNLLKVATSIVRYQQAFLQYGATAMQPLILKVIADEVDLHESTVSRLTTS
KTILTPQGLFSLKHFFSSHVSSSDGDISSIAISAMIKQLIADEEPKKPLSDSKIKNYLLA
EGIDIARRTVAKYREAMSIGSSTQRKQKY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtcgttcggattggcgaccacgctaagcatctcacaaaaactgaccccgcaa
atgcagcaagctattaaattgctgcagctctctagtcttgagcttgcgcaggaggttcaa
gcgaagctggatagtaatccactactagaacgcatcgaagacgatgaagatgagtatgaa
agtgccgataaaagtgccgataaagacgcgttagttgagtttggcgagccactaacgcta
gacagctggaatcaaaacacggcttctgacacattttccgtatcttcttcaagtaataat
gaggatgagtttgagtatgatgacagtattagcgatagcctagataaattgcagcaagac
agttttgatacggatgccatagacagttatatgcttgaggacttcgacggttcaaatgaa
gaaagcctcaactatgatagcccttatgcagaatatgatggttttgacacagccagtgct
ggtacaggcagcccgtcagcgcgtccagattctgatgactttgatagctatcaaggcagt
accaatgcgacgattcaagaccatgtgcgctggcagctaaattttaagcgactctcagag
acagatacgcttatcgctgagtatctgatggactctatggacgatatgggttttgtacgg
cttgatatcgaggagttgctacaaagctttgataccattgcgagtttttatcagtgggat
gagcgtgttgaacatgacgaagtgatggccgtactgcgtatgattcaatcctgtgatccg
ctgggggttggtgcgcgaaatctaagtgaatgcctagcgattcagctatctaagctcgat
actgacataccgtatctcaaacaagcccaagcgctcttgtcagccagtgagcatctggtc
agtaataacattaaagccttaactgagcgcacaggacttgctgcacaggagattaccccc
gcacttatgctgttacgcagtttgaatccttcaccaggattgctgtttcagagtcgccaa
cctgattatactcagtcgcccgacagttatgatatccctgatgtactggtgacgcctatc
cgtcgccatgatgccaatcaaaacaccgacacatctacccaagaggatggctggcaggta
cgtctaaaccctgaaactttgccaaaactacgggtcaatcaagaatatgccaaccttgtt
aagcgcggtgataatagccctgataatcaatatctgcgtgaaaatctcaccgatgcgcgc
ttgtttattcgcagtatcgaagagcgtaatcagaaccttttgaaggtggcgaccagtatc
gtccgctaccagcaagcgtttttgcagtacggtgccactgccatgcaaccgcttatttta
aaggtaattgcagacgaagtcgatttacacgaatcaacggtctcgcgcctgactaccagt
aagaccattttgaccccacaaggtctgttttcgctcaagcacttcttttcatcacatgtt
agcagcagcgatggcgatatctcatcaattgctatcagcgcgatgattaagcagcttata
gccgatgaggagcccaaaaagccactatccgacagtaagataaaaaattatttgttagca
gaaggtatcgatattgccagaagaacagttgccaaatatcgtgaagcgatgagtatcggc
tcatctactcagcgcaaacaaaaatattaa
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