Psychrobacter arcticus: Psyc_0292
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Entry
Psyc_0292 CDS
T00256
Name
(GenBank) possible guanine-specific ribonuclease with a cold-shock DNA-binding domain protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
par
Psychrobacter arcticus
Brite
KEGG Orthology (KO) [BR:
par00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
par03019
]
Psyc_0292
03016 Transfer RNA biogenesis [BR:
par03016
]
Psyc_0292
Enzymes [BR:
par01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
Psyc_0292
Messenger RNA biogenesis [BR:
par03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psyc_0292
Transfer RNA biogenesis [BR:
par03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Psyc_0292
Prokaryotic type
Psyc_0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
CSD
OB_RNB
DUF6548
DUF5316
CusF_Ec
Orf78
WTF
Motif
Other DBs
NCBI-ProteinID:
AAZ18162
UniProt:
Q4FUZ6
LinkDB
All DBs
Position
complement(357728..358471)
Genome browser
AA seq
247 aa
AA seq
DB search
MQSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVQMAQPISEGQRVYFNSERNDKNQLRA
TEVTSDELSILETSVENPAHRSSVNHNQKNNRNHTRKNNRGSQNKKSSLSTLFSLIAIIA
VAVYFFADIKSSFFADSTPPATLTQNSIETASTANAVAITGDAQIDQTIALIQQGGPFSY
PNKDGTKFYNREGKLPAESQGYYREYTVPTPTVSHRGARRIVTGGHPPTIYYLTLDHYDS
FQKLEVK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtggcaaaattaagcactggaattccgataaaggctatggctttatcgacgtc
gacaatcaaagtgaagacgttttttttcatataaaatcagtgcaaatggcgcagcctatt
agcgaagggcaacgcgtctatttcaatagtgagcgcaatgacaaaaaccagttgcgcgcc
accgaagtcacatcggatgaattgagcattttagaaacttcagtagaaaatccagctcat
cgcagctcagttaatcataatcaaaaaaacaaccgaaaccatactcgtaaaaataatcgt
ggaagccaaaacaagaaaagtagcctctctaccctattcagcttgattgccattatcgct
gttgcggtttacttctttgctgatataaaatccagcttttttgcagatagcacgccacca
gctaccctaacgcaaaactccattgaaaccgctagcaccgcaaatgcagtggctatcact
ggtgatgcgcagatagatcaaaccattgcgcttattcagcaaggcggtcctttttcttac
cctaacaaagatggcaccaagttttataatcgagaaggcaagctaccggcggagtcgcaa
ggttactatcgtgaatatactgtacccacgcctacggtttctcatcgcggtgcacggcgt
attgttactggtggtcacccacccaccatctattacttgacccttgatcattacgacagc
tttcaaaaactggaggtgaaataa
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