Psychrobacter arcticus: Psyc_0378
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Entry
Psyc_0378 CDS
T00256
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
par
Psychrobacter arcticus
Pathway
par03030
DNA replication
par03410
Base excision repair
par03420
Nucleotide excision repair
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyc_0378 (polA)
03410 Base excision repair
Psyc_0378 (polA)
03420 Nucleotide excision repair
Psyc_0378 (polA)
03440 Homologous recombination
Psyc_0378 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
par03032
]
Psyc_0378 (polA)
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0378 (polA)
Enzymes [BR:
par01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyc_0378 (polA)
DNA replication proteins [BR:
par03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Psyc_0378 (polA)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Psyc_0378 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psyc_0378 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
PH_S11IP
Motif
Other DBs
NCBI-ProteinID:
AAZ18247
UniProt:
Q4FUR1
LinkDB
All DBs
Position
complement(469527..472397)
Genome browser
AA seq
956 aa
AA seq
DB search
MTTTHVDKNQPPFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHP
THMAVCFDTKSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEAD
DIIGTLAYRAVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKITDSTGVVEKFGINPDQ
MIDFLTLMGDSSDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKGRAGKNLLEYADD
IPMNAQLATIVTDLEVGQDWQDLKINTDPCAHIDELRALYSELEFRNELASLDHPNHPAN
GAQSVAHSQADTESQAQIAKSLQSSAIGDVTDSKSHDRAWHTILDEPAFDNLVQLLASAP
HFVIDTETTSVYWRQAELVGLSFAVQAHEAYYIPLTHSLEGDELTEKQLDRDTVLVRLKS
ILENSSIGKIGQHLKYDAHILSLYDINLLGNIHDKPNNWAMDTMLASYVINAAVTRHGMD
DLARHYLQTQTISFEDVAGKGAKQVSFDQVAIDIASDYACEDADITYQLFELFSQKLADD
TNNAKLLHALEIPTAEILCQMEAHGILIKRPFLNELSKRFDEEIIALEKRAYEVAGEEFN
LGSPKQLGEMLFDKLGVAGGKKTKTGQYSTGEAVLSKIDHPLVDITLEYRGLSKLKSTYT
DALDNVADSETDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAPEGRVI
LAADYSQIELRLMAHFSGDKNLTHAFNEGLDIHAATAAEVLGKEVADVTATERRNAKAIN
FGLLYGMSAFGLAKQLQMSRSEAQDYIDMYFERYPGVKDYMINTRASAYEHGYVETILGR
KLYTPDINHSNRMVKQGAERAAINAPLQGSAADLIKLAMIAVDKVLPKHQAKMLLQVHDE
LVFEVDANKVDEISQLITDAMQNVLTATAVEKGWNVNFAVPLLVETDSGQNWDEAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacacatgtggacaaaaaccagccaccttttatattggtcgatggctcttat
tatctgtttcgcacctatcatgcgctgccaaaaaccatgcaaaattcgcaagggctagtc
accaatgcgatacgtggcacactcaatgcgctgttaaagctgatgcgccgctatcaccca
acgcatatggcggtttgttttgataccaaatcaccgacctttcgccatgccatgtcagaa
gagtacaaagccaatcgtccaaaaatggatatagagctggctgagcagattccttatatt
catcgtttggtcaccgcacttgggattccactgttacgtatcgaaggcgcagaagcggac
gatatcatcggtacgctcgcctatcgtgcggtcgccgaagggcatcacgtggttatctca
accggtgataaagacatgatgcagctgattaatgactgcgtgatattagaagacagcttt
acaggtaagataactgacagcactggcgtggtcgaaaaattcggtattaatcctgaccag
atgattgattttttaactttaatgggtgattcctctgacggtatcaaaggcgtacccggc
atcggtaaaaagactgccaaagacttgttaaatgaatatggcaatatcgataatatgcta
aaaaacgttgccaatataaaaggacgtgcgggtaaaaacttgcttgaatatgctgatgat
attccgatgaatgcgcagctggcaaccatcgtcactgatttagaagttgggcaagattgg
caagatttaaaaataaacactgatccttgcgcccatatcgatgagctacgcgctctatac
agtgagcttgaatttagaaacgagctggcgtcacttgatcaccctaatcatccagccaat
ggtgctcaaagtgtcgctcatagccaagctgatactgagtcacaggcgcaaatcgccaaa
tctttacaatcaagcgccattggtgatgtcaccgatagcaaaagtcacgacagagcgtgg
catactattttagacgagcccgcctttgataacctagttcaactattagcctctgccccg
catttcgtcattgataccgagaccacaagcgtctattggcgtcaggctgaattggtcggc
ttgtcttttgccgtgcaagcacacgaagcttattatataccgctaactcattcgctagaa
ggcgacgaattaaccgaaaagcagctcgatcgcgatacggtacttgtccgcttaaaatct
attttagaaaactcaagcattggtaaaatcggtcagcacctaaaatatgatgcgcatatc
ctcagcctttacgatatcaatctcttaggcaatattcatgacaagcccaacaactgggcg
atggataccatgcttgccagctatgtgattaatgccgctgttacccgtcacggtatggat
gatctggcacggcattatctgcaaacgcaaaccattagctttgaagatgtcgctggtaaa
ggtgctaagcaagtgagttttgatcaagtggcgattgatattgccagcgactatgcttgt
gaagatgctgatatcacttatcaattattcgagctgtttagtcaaaagcttgctgatgac
accaataacgccaagctgctacatgcactggagattcctacagcagagatactctgccag
atggaagctcatggtattttaattaagcgtccatttttaaatgagttatcaaaacgcttc
gatgaagaaattattgcccttgaaaaacgtgcttacgaagtggcgggagaagagtttaat
ctcggctctcctaagcagcttggggagatgctatttgataagcttggcgttgctggcggt
aaaaaaaccaagactggtcaatactctacgggtgaagccgtattgtcaaaaattgatcat
cctttggtcgatattaccttagagtatcgcggactctctaaactcaaaagcacctatact
gatgcgcttgataatgtggcagatagcgagactgaccgtgtacatactagctatcatcaa
gctttaactagcacaggacgcttatcttcaacagatcctaatttacaaaatattcctatt
cgcactgcgaccggtcgcttgattcgtcaagcctttattgcgccagaaggtcgggtgata
ttagcggcggattattcgcaaatcgagttgcgtttaatggcgcatttctcaggtgataaa
aacctgactcatgcctttaatgaagggcttgatattcacgctgccaccgctgctgaagta
cttggcaaagaagtggcggatgttaccgcaaccgagcgtcgtaatgccaaagctattaac
tttggtctgctctatggcatgagtgcctttggacttgccaaacaactacagatgagccgt
agtgaggcgcaagactatattgatatgtactttgagcgctatcctggcgtcaaagactat
atgatcaatactcgtgccagcgcctatgagcatggctatgtcgagacgatattgggtcgt
aagctttatacccctgatattaatcatagcaatcgtatggttaaacaaggcgctgaacga
gcggcaattaacgcaccattacaaggctcagcggccgatttgattaaacttgcgatgatt
gccgtcgataaagtactaccaaaacatcaggcaaaaatgctactgcaagtccatgacgaa
ttggtgtttgaagttgatgccaacaaagtcgatgaaataagccaattgattactgacgct
atgcaaaatgttttgacagcgacggcggttgaaaaaggctggaacgtcaactttgcggta
ccgctattggttgagacggacagtggtcaaaattgggatgaggcgcattaa
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