Psychrobacter arcticus: Psyc_0487
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Entry
Psyc_0487 CDS
T00256
Symbol
rne
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
par
Psychrobacter arcticus
Brite
KEGG Orthology (KO) [BR:
par00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
par03019
]
Psyc_0487 (rne)
03009 Ribosome biogenesis [BR:
par03009
]
Psyc_0487 (rne)
Messenger RNA biogenesis [BR:
par03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psyc_0487 (rne)
Ribosome biogenesis [BR:
par03009
]
Prokaryotic type
rRNA processing factors
Psyc_0487 (rne)
SSDB
Ortholog
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GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AAZ18350
UniProt:
Q4FUF8
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All DBs
Position
593525..595111
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AA seq
528 aa
AA seq
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MSEELLINISPMESRVAVLDNGILGEIYIERHHKLGLVGNIYLGTVVRVLPGMQAAFVDI
GQSRTAFLHVNDMQREPRPVAKSSKIEKTDDERTIIEATADDLAVTPPVVSTQSTEAVLI
SKTLIQHRLHESQRILVQVTKDQLGSKGARLTTNISLPSRYLVYLPSSDHIGISQRIDGE
DERTRLKTELNSLMQTVNLKGGLIARTAAERVPVDKLEEDIYYLLQLWRTICARHQEMKQ
HQSSELIYQELSLPLRSIRDLVHADTEKVIIDNAQIYEQVRYFAKEFVPFVYDRIVHYTA
EQSLFDVHRVEDDLRDALKRRVDLKSGGYLIIDQTEAMTTIDVNTGSFVGGRSLEDTVYK
TNLEATHAIARQLRLRNLGGIIILDFIDMLEQQHKDDILESLQSQLVQDYAKTKITQVSE
LGLVEMTRKRTRESLGQQLCEPCSTCQGRGFVKTAETVCFEIFREIMRCARTYNSPKKFT
VVAHAAVIDLLLTSESDTVADLEYLLGRVITFDVENLYTQEQYDIVLD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagagctgctgattaatattagtcccatggaatcccgtgtcgccgtattagat
aacggtatcttgggcgagatttatattgagcgtcatcataagctgggtttggttggtaat
atttacttgggcacagtggtgcgtgttctgccgggtatgcaagcagcctttgtcgatatt
ggtcaatcacgtaccgcattcttacacgttaatgatatgcagcgcgaaccacgtccagtc
gcaaaaagcagcaagattgaaaagactgatgatgagcgcacaattatagaggcgactgct
gatgatctagccgtcacgccgcctgtagtaagtacgcaaagtacagaagccgtactgatt
tcgaaaacccttatccagcatcgtctgcatgaaagccaacgtattttggtacaagtgacc
aaagatcagctgggcagtaaaggcgcgcgcttaaccaccaatatatcgctaccatcacgc
tatctggtctatttgccatcgagtgatcatatcggcatctcgcagcgtattgatggtgaa
gatgagcgtactcgcctcaagactgagctgaatagtcttatgcaaaccgtcaatcttaaa
ggtggactgattgcgcgtacggcagctgaacgggtacctgtcgataagctcgaagaagat
atttactatcttttgcaattatggcggacgatttgtgcccgtcaccaagagatgaaacaa
catcaaagctctgagcttatttatcaagaattgtcactaccgctacgctctattcgtgat
ttggtacatgccgataccgaaaaagtgattattgataatgcgcagatatatgagcaggtt
agatactttgccaaagaatttgtcccttttgtttatgatagaattgtgcattacacagct
gagcagtcgctatttgatgttcaccgtgtcgaagatgatttacgtgatgcgctcaaacgc
cgcgttgatttaaagtctggtggctatctgattattgatcaaaccgaagcgatgacaact
atagatgttaatactggctcatttgttggtggacgttcactagaagataccgtctataag
actaatctagaagccacgcacgcgattgcccgtcagctgcgcctgcgtaatctgggtggt
atcatcatcttagactttattgacatgcttgagcagcagcataaagatgatatccttgag
agcttgcagtcacagctggtacaagattatgccaaaaccaaaatcacccaagtcagtgag
cttggtttggttgagatgactcgtaagcgtacccgtgagtcgcttgggcagcagctatgt
gagccgtgctcgacctgtcaaggacgtggttttgtcaaaacagctgaaaccgtctgcttt
gagatattccgtgaaattatgcgttgcgctcgtacttacaactctcccaaaaagtttacc
gttgtcgcccatgcagctgtgattgatttattactgacttcagagtcggataccgtagca
gatttagagtatctactcggtagagtgattacctttgatgtcgaaaatttatatacccaa
gagcaatatgatattgtgttggactga
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