Psychrobacter arcticus: Psyc_0514
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Entry
Psyc_0514 CDS
T00256
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
par
Psychrobacter arcticus
Pathway
par03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Psyc_0514 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
par03021
]
Psyc_0514 (rpoA)
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0514 (rpoA)
Enzymes [BR:
par01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Psyc_0514 (rpoA)
Transcription machinery [BR:
par03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Psyc_0514 (rpoA)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Psyc_0514 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
Motif
Other DBs
NCBI-ProteinID:
AAZ18377
UniProt:
Q4FUD1
LinkDB
All DBs
Position
608345..609352
Genome browser
AA seq
335 aa
AA seq
DB search
MMLNATEFLTPNAINVDTVNETIAKVTLEPLERGFGHTLGNALRRILLSSLPGAAVIEAE
IDGVDHEYSTLEGLQEDVLDLLLNLKGLAITLHDQNEVFLTLDKQGPGTITAADITLPHN
VDIINPELVLGTLSDRGHLKMRLRVVMGRGYEPANQRREDGDTKAIGRLKLDASFSPVLR
VAYQVENARVEQRTDLDRLIIELETNGTIDPEEAIRKAATILQQQISIFVDLEAEEAPEP
VKEKEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTE
IKDVLASKDLELGMRLDNWPPADLRVDDRFSYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaatgcaactgagtttctaacgccgaacgccatcaacgtggatacggttaat
gaaacgattgcgaaagtcacgctcgaaccgttagaacgcggctttgggcataccttgggt
aatgccttacgtcgcatcttattatcttcattacctggtgctgcagtcattgaagctgag
attgatggtgttgaccatgaatactcaacgcttgaaggactacaagaagatgtacttgat
ttgcttttgaacttaaaaggcttagcaatcacccttcatgaccaaaatgaagtatttttg
accttggataaacaaggtccaggcactattactgctgcagacatcacgttaccgcacaat
gtagacatcatcaatccagaattggtattgggtacattgagtgaccgtggtcatctaaag
atgcgtttgcgtgtagtaatgggtcgtggatatgagccagcaaaccaacgccgtgaagat
ggcgatactaaagctattggacgcttaaagcttgatgcaagttttagtcctgtgcttcgt
gttgcttatcaggttgagaacgcacgtgtagaacaacgtactgatcttgatcgtcttatc
attgagcttgaaacaaatggcactatagatccagaagaagcaattcgtaaagcagccact
atattacaacaacagatttctatctttgttgacctagaagctgaagaagcgcctgagcct
gtgaaagaaaaagaagaggttgatccggtgctattacgccctgtggacgatcttgaacta
acggttcgctcagccaactgcttaaaagctgaaaacatttactatatcggtgatttggta
cagcgttcagagactgaacttctaaaaaccccaaatcttggtaagaaatcattaacagaa
atcaaagacgtactagcgtctaaagatttggagcttggtatgcgcctggataactggcca
ccagctgatttacgtgttgatgatcgcttttcttatcgtagccgttaa
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