Psychrobacter arcticus: Psyc_0733
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Entry
Psyc_0733 CDS
T00256
Symbol
recJ
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
par
Psychrobacter arcticus
Pathway
par03410
Base excision repair
par03430
Mismatch repair
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psyc_0733 (recJ)
03430 Mismatch repair
Psyc_0733 (recJ)
03440 Homologous recombination
Psyc_0733 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0733 (recJ)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Psyc_0733 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psyc_0733 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Psyc_0733 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ANIS5_cation-bd
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
AAZ18587
UniProt:
Q4FTS1
LinkDB
All DBs
Position
873984..875810
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AA seq
608 aa
AA seq
DB search
MLNLTPRYTSTRIDELPAALQPLAAQSLTLARLYAGRGILQPDELEIQLASLLPAERLKG
VTEAVRLLDVAIDEGQRILIVGDFDCDGATSTALMMRALTAMGAKVDFLVPDRFKYGYGL
TPEIVELGIETYQPQMIVTVDNGISSHEGVARAQADGITVIITDHHLTTKETPPAEAVVN
PNQLDCNFASKALVGVGVAFYVLGRLAKLRREAGKSTVQVSQYLDLVALGTIADVGVLDK
NNRILVHHGLAAIRQGRGSLGILALLEQAGRDPKKLQAQDFGFVLGPRINAAGRMDNMRI
GIECLLADDWATAQRLAQELEQLNRTRRHVEGEMRAQADDIVQALAAADAGIEANADESG
DIIVQHKLEKKTTNTRSIVLYQDDWHQGVIGIVAGRLKESHYLPSIVFAPADTKRIGDDD
AIKGSARSITGVHIRDAIEQVAESHPDLISHFGGHAMAAGLTLKRGNFDAFVAAFNDVLA
QMDDEVFAEKKFTDGPLQAGDFSLWFAEYLAESSIWGHGFAPPIFDGVFEVLNFKVLKDK
HLKLSLRYPDVQYPIEAIQFNFDSSAWDYRAGKVHVLFELNINEWNGKQSLQLMIKDLAL
VKETVEES
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatttaaccccccgttataccagcactcgcatcgacgagttgcccgccgcgttg
caaccacttgccgcccaatccttgacgcttgctcggttatatgccggtcgcggtatcctg
cagcctgatgagcttgaaattcagctagctagtttattacctgctgagcgcttaaaaggc
gttaccgaagcggtacgtttgttagatgttgctatcgatgaaggtcagcgcattttgatt
gttggcgactttgattgtgatggcgcgaccagcacggcgctaatgatgcgcgcgctgact
gctatgggcgcgaaggtggattttttggtgcccgaccgctttaaatacggttatggtctg
acgccagagattgtcgaattgggtattgaaacttatcaaccgcaaatgatcgttacggta
gataatggtatctcaagccatgaaggcgtggcacgtgcgcaggctgatggtatcactgtc
attattactgaccatcatctgacaaccaaagagacaccgcctgctgaagccgtggttaat
cccaatcagcttgattgtaactttgctagcaaagccttggtgggtgttggggtagcattt
tatgtgcttggacgactggcaaagctgcgccgggaagcgggaaagtctaccgtacaagtc
agccaatatttagatttagtggcgcttggcacgattgctgatgttggagtgctcgataaa
aacaatcgtattttagtacatcatggcttagctgctattcgtcaagggcgtggctctttg
gggatactggcattgttagagcaagcgggtcgcgatcccaaaaaactacaggcgcaagat
tttggttttgtcttaggtccacgtattaatgccgctggtcgtatggataatatgcgcatc
ggtattgaatgcttgttagcggatgattgggcaacggcgcagcgattggcgcaagagctt
gagcagctcaaccgtacgcgtcgccacgtagaaggtgagatgcgtgcacaagcggatgat
atcgtccaagcattagctgctgctgatgcaggtattgaagctaatgctgacgaaagcggt
gatatcatcgttcagcataaacttgagaagaagaccactaacacccgcagtatcgtgtta
tatcaagatgactggcatcaaggtgtcatcggtatcgttgcagggcgtttgaaagaaagc
cattatctgcccagtattgtctttgcaccagcggatactaagcgcataggcgacgacgat
gctattaaaggctcagcacgttctatcactggcgtgcatattcgtgatgctattgaacaa
gttgccgaaagtcatcctgatttaatcagccattttggtggtcatgccatggcagccgga
ttaacgttgaaacgtggtaactttgatgcctttgtcgccgctttcaatgatgtgctggca
cagatggatgatgaggtattcgccgagaagaaattcaccgatggccctctacaagcaggt
gattttagtctgtggtttgccgagtatctggcagaatctagtatttgggggcatgggttt
gcaccgccgatatttgacggggtgtttgaagtattaaactttaaggtactaaaagataag
cacctcaaattatcgctacgttatcctgatgtgcagtatccgattgaagccattcaattc
aattttgatagcagtgcttgggattaccgcgccggaaaagtgcatgtattgtttgagctg
aacattaatgagtggaatggcaaacaaagcttgcagttgatgataaaagatttggcgctt
gtaaaagagacggtagaagagagctag
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