Psychrobacter arcticus: Psyc_0744
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Entry
Psyc_0744 CDS
T00256
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
par
Psychrobacter arcticus
Pathway
par03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psyc_0744 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0744 (uvrB)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psyc_0744 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psyc_0744 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
DUF87
SWI2_SNF2
Microtub_bd
Collagen_bind_2
AAA
DUF8810
Motif
Other DBs
NCBI-ProteinID:
AAZ18598
UniProt:
Q4FTR0
LinkDB
All DBs
Position
887460..889571
Genome browser
AA seq
703 aa
AA seq
DB search
MRMPEPRSSRQLNQLATQLQGEAEISGVNASGTQISSRAFEMVTEFEPAGDQPQAIKKLV
NGINSGMDEQLLLGVTGSGKTYTMAKVISETQRPTIIMAHNKTLAAQLYGEFKSFFPNNA
VEYFVSYYDYYQPEAYVAASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSCI
YGLGDPESYLKMLLHVVVGDKIDRTATIKRLVEMQYTRNELDFGRGTYRLRGELLDIYPA
ESEQLAVRVHLFDNEVEKITWFDPLTGKTVRTVPRITIYPKSHYVTPRNKLEAASHTIRA
ELEPRLEYFRENNKLIEAQRLKERTQYDLEMIQQLGYCNGIENYSQHLSGRPSGEAPPTL
FDYIPEDALLFIDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWERI
KPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREKD
ERVLITTLTKRMSEDLTSYLKEYDVKVAYLHSDIDTLERMQIIHELRTGVHDVLVGINLL
REGLDMPEVSLVAIFDADKEGFLRSERALIQTIGRAARHINGKAILYADRITNSMQKAID
ETDRRREKQVAFNLEHNITPTGARRSITDKIDTGDDLDANDNQAIPVKSNLPDVDISILR
SPDLLAKEINRLEKLMKQMSRDLKFEDAAKTRDKVLELKAHLI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgcctgaaccgcgctcatcgcgtcagttaaaccaattggccactcagctacaa
ggcgaagctgaaattagtggtgttaatgcgtctggtacgcaaatatcaagtcgtgccttt
gagatggttaccgaatttgagcctgcgggggatcagccgcaagcgatcaaaaagctggtt
aacggtatcaattctggtatggatgagcagttattactgggcgtgacgggttctggtaag
acgtataccatggcaaaggtcatctctgagactcaacgcccaaccattatcatggcgcat
aataagacgcttgccgcccagttatatggtgaatttaaatcgtttttccctaataatgca
gttgaatatttcgttagttattatgactattatcagccggaagcatatgtcgcagcgagc
gatacctttatcgaaaaagacagcgccattaatgatcatattgaccagatgcgtctgtca
gccacacgtgcactacttgagcgtcgtgatgcaattatcgtcgcatcggtatcatgcatt
tatggtttgggtgatccagaaagttatctgaaaatgctgctccacgtcgtcgtcggtgac
aaaatagaccgcaccgcgacgattaagcgtctggttgagatgcaatatacgcgtaacgag
ctggactttgggcgtggtacttatcgtctgcgcggtgagctactagatatctatcctgct
gagtccgagcagctggctgtgcgtgtacatttgtttgataacgaagtggaaaaaattact
tggtttgaccctttaacgggcaaaacggtgcgtactgtaccgcgcattaccatctatcca
aaatcacattatgtgacaccgcgtaataaactggaagctgccagtcataccatccgcgcc
gagcttgagccgcggttagagtattttcgtgaaaataataaactgattgaagcacaacgt
ctcaaagagcgtacccagtatgaccttgagatgattcagcagctcggctactgtaacggt
attgagaactactcacagcatctgtctggtcgcccgtcaggtgaagcgccgccgacgttg
tttgattacattccagaagatgcgctgctattcattgatgaatcgcacgtgacggtatcg
caaattggcgcgatgtataaaggcgatagatcacgtaaagaaaatctcgtcaattacggc
tttcgtctaccgagtgcgatgaataaccgtccgatgaagtttgaagagtgggagcgtatt
aagcccaagaccatttatgtcagcgctacgcctgcgttgtatgagcttgagcatagcgag
caagtggtcgagcaagtggtgcgtccgactggtttgattgaccctgagattgagattcgt
cccgtattgacgcaagtcgatgatgtgttgtctgagattaccaaacgccgtgaaaaagat
gagcgcgtactgattacgactttgactaagcgaatgtcagaggatttgaccagttatctg
aaagaatatgatgtcaaagtcgcctatttacattcggatattgatacccttgagcgcatg
cagattattcatgaattgcgtactggtgtacatgatgtgctggtcggcattaacttgcta
cgtgaaggtcttgatatgcctgaggtgtcattggtcgcgatatttgatgcagataaagag
ggctttttgcgctctgagcgtgccttgattcagactattggtcgtgctgcccgtcatatt
aatggtaaagcgattctttatgccgatcgtattaccaatagtatgcaaaaagcgattgat
gagacggatcgtcgccgcgaaaaacaagtggcatttaaccttgagcataacattacgcca
acaggtgctcgccgtagtatcacggataaaatcgatacgggcgatgaccttgatgccaat
gataatcaagcgattccggtcaaaagcaatctacctgatgttgatatcagtatcttacgc
agtcctgatttgctcgccaaagaaattaatcgccttgagaagctcatgaagcagatgtcg
cgtgacttgaagtttgaagatgcggcaaaaacacgtgataaggtgcttgagttaaaggcg
catttgatttag
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