Psychrobacter arcticus: Psyc_0833
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Entry
Psyc_0833 CDS
T00256
Symbol
rnhA
Name
(GenBank) bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
par
Psychrobacter arcticus
Pathway
par03030
DNA replication
par03430
Mismatch repair
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyc_0833 (rnhA)
03430 Mismatch repair
Psyc_0833 (rnhA)
03440 Homologous recombination
Psyc_0833 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
par03032
]
Psyc_0833 (rnhA)
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0833 (rnhA)
Enzymes [BR:
par01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyc_0833 (rnhA)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Psyc_0833 (rnhA)
DNA replication proteins [BR:
par03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psyc_0833 (rnhA)
RNase H
Psyc_0833 (rnhA)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psyc_0833 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAZ18686
UniProt:
Q4FTH2
LinkDB
All DBs
Position
complement(1000960..1002543)
Genome browser
AA seq
527 aa
AA seq
DB search
MSDNRSAVQPFKTNSAINPLAAKADTTVAYTDGACKGNPGAGGWGAHLIFSDGRTQDLYG
GDKETTNNRMELMGAIQALTHSPHEQNLEIWTDSSYVKKGITEWIEGWKKRGWKTASKKP
VANQDLWQRLDELCQHRDVDWHWVKGHAGHAGNEKADELANLGVTSRSEYLIRDAQDNIK
KKQQITADKKPSSSDDWLNFDPLGFDMMDDELEEDVDQELDKTQLDGQVLEDFHYQTSNT
DIPEAHTFMTDTTMNPNMSDIDTDIDTDIANETPKFDGDTSRANPYFIALLPKPIHRHES
DRQLIMDTETTGLDPLKGDRIIEVGIVEMIGRKFTGEKLHVYINPQRGMDEEVIRIHGIS
EAFLTDKPTFDQVAQSLYDFMDGAEIIAHNASFDMNFLNMEFAKVGMHDFAERVRVTDSL
VMAKQQYPGQKNTLDALVRRLDVGKQDRTFHGALLDSEILAEVYLTMTGGQVTLGIEDDT
QADGGHTAHASFANLAALLLESSTDESANQSWYASLAQDYPELKAKM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaatcgcagtgcagtgcaaccatttaagaccaatagcgccatcaacccattg
gctgccaaagcagatacaacggttgcctacactgatggcgcttgtaaaggcaatcctggt
gctggcggctggggcgcgcacctgatatttagtgatggacgtacgcaagatttgtatggc
ggcgataaagaaacaaccaataatcgtatggagctgatgggtgcgatacaagcattgacc
catagtccgcatgagcaaaacctcgagatttggacagattcaagctatgtcaaaaaaggc
atcactgaatggattgaaggttggaaaaaaagaggctggaaaacggccagtaaaaaaccc
gtcgccaatcaagacctatggcagcgactcgatgagctgtgccaacaccgtgatgttgat
tggcattgggtcaaaggtcatgcgggacatgcgggcaatgaaaaagcggacgagctggcg
aacttaggtgtgacctcacgtagtgaatatttgataagagacgctcaagataacattaaa
aaaaaacagcaaataacggctgataaaaagccatcaagcagcgatgattggctgaatttt
gatccattaggttttgatatgatggatgatgagcttgaggaagacgttgaccaagagctt
gataaaacccagttagatggacaagtattagaagactttcattaccaaacatctaataca
gatataccggaagcccatacctttatgactgataccacgatgaatcctaatatgtccgac
atagacactgatatagacactgatatagcaaatgaaacgccaaaattcgatggtgacact
agccgtgccaatccctattttatagcgctgctacctaaacctatccatcgtcatgaatct
gatcgtcagctcattatggacactgagaccacaggtcttgatccgctaaaaggcgatcgc
attatcgaagtcggtattgtagagatgatcggacgtaaattcaccggtgaaaagctccat
gtctatatcaatccacagcgtggcatggatgaagaagtgattcgcattcatggtatctct
gaagcgtttttaacggacaagccaacctttgaccaagtcgctcaatcgctctatgacttt
atggacggtgcagaaatcatcgctcataatgcctcgtttgatatgaatttcttaaatatg
gagtttgccaaggttgggatgcatgactttgctgagcgggtgcgagtgacagactcgctg
gtcatggcaaagcagcaatatcctggacaaaagaacaccttggacgctctcgtacgtcgc
ttagatgtgggcaagcaagaccgtacgtttcacggggcattactagattcagagatttta
gcagaagtatatctgacgatgaccggcgggcaggttacactggggattgaggatgacacg
caagcggatggtggacacactgcccatgctagctttgccaatttagcggctttattgctt
gagtcgagtactgatgagagcgccaatcaaagctggtatgcgtcgctcgcacaagactat
cctgagctaaaagccaaaatgtaa
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