Psychrobacter arcticus: Psyc_1064
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Entry
Psyc_1064 CDS
T00256
Symbol
sbcD
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
par
Psychrobacter arcticus
Brite
KEGG Orthology (KO) [BR:
par00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_1064 (sbcD)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psyc_1064 (sbcD)
Archaeal homologous recombinant proteins
Psyc_1064 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
CobU
DUF5917
Motif
Other DBs
NCBI-ProteinID:
AAZ18916
UniProt:
Q4FSU2
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All DBs
Position
complement(1271096..1272682)
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AA seq
528 aa
AA seq
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MAVFYSPLSLIMSVSAVTPLTILHTSDWHLGRRLYGRLRYDEFAAFLSWLQDTISAQQVD
VLIVAGDIFDTMTPSNKAQALYYEFLGTVSKSCCQHVVIVAGNHDSPTFLDAPSHVLKFL
NVHVVGTACEDLNDEVMVLDDADGNPHCIITAVPYLRDRDVRSSSAGESAQSKDANVIAG
ICAHYDGVAEISRAKQAELAKVHKRHVPIIATGHLFAAGGTTTDDDGVRELYIGSLGKVS
ADMFSESFDYVALGHLHVPQRVGGRETIRYSGSPIAMGFGEARQQKQVLLVQFGSVLKNK
DLTLTNTSKRICHQQLTNSIINIDKTVEKTAKAVNQAASFMDDLFADVESIESDQHSETS
IEETSKQTEVILSTHSTLTATLLHHDTARQMQITSLPIPTFQKLAQVSGDLDTINQTVDN
TIKTLTDTESVWLEIIYTGDEVVSELRESIQAMVEGLPCEVLKIKDTRTYNKVLNQQQIS
ETLQDLNEQEVFERCLTAHNVPDEQRLTLREAYGQIVYDLHHADTQAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttttattcaccattaagcctcattatgtctgtatctgctgttacccctctc
actatcctgcacacctctgactggcatttgggacgacgactttatggacgtctgcgctat
gatgaatttgccgcctttttaagctggctacaagacaccattagtgcgcagcaagtggat
gtacttattgtcgctggtgatatctttgatactatgacgccaagtaataaagcccaagcg
ctgtattatgagtttttaggcacggtttcaaaatcatgctgtcagcatgtcgtcatcgtc
gctggcaatcatgattcaccaacatttttggatgccccaagtcatgtacttaagttttta
aacgtccatgtcgttggtacggcttgcgaagacttgaatgatgaggtgatggtattagat
gatgcagatggtaatccgcattgtattatcacggctgtcccttatctgcgtgaccgtgat
gtgcgcagtagtagtgctggcgagtcagctcaaagcaaagacgccaatgttatcgctggt
atctgcgcgcactatgatggtgttgcagagatttccagagccaaacaagctgaattagcc
aaagtgcataagcggcacgtccctatcatagctacaggacatctgtttgctgccggcggc
accactaccgatgatgatggggtgcgtgagctgtatattggctcgcttggtaaagtctcc
gctgatatgttcagtgaaagttttgattatgtagcgcttggacatttgcatgtaccgcag
cgcgtcggtgggcgtgaaaccattcgctattcaggctcgcctattgcgatgggttttggt
gaggcgcgccagcaaaaacaagtattgctggtgcagtttgggtcggtgctaaagaataaa
gatctaacactgacaaatacgtctaagagaatttgtcatcagcagctgacgaattccatt
atcaacattgacaagacagtagaaaaaaccgctaaagcagtcaatcaggcagcgagcttt
atggatgacctgtttgctgatgtggagtctatagaaagcgatcagcatagtgaaacgagt
attgaagaaacctctaaacaaacagaggttattctaagtactcattccactttaaccgcc
acgctactgcatcatgataccgcccgtcagatgcaaatcacttccctacctattccaaca
ttccaaaaattggcgcaagtatcgggtgatttggataccatcaatcaaacagttgataac
actattaagactctgactgatacagaatcggtctggttagagattatttacaccggtgat
gaggtggttagcgaattgcgtgaaagtattcaagcgatggtagagggcttaccctgtgag
gtgttaaaaataaaagatacgcgcacttataacaaagtactgaatcaacaacaaatttct
gagacgctacaagatttaaatgagcaagaagtatttgagcgctgcttaaccgctcacaac
gtccctgatgagcaaagactaaccttgcgagaggcttatggtcaaatcgtttatgacctg
catcatgcagatactcaagctgaataa
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