Psychrobacter arcticus: Psyc_1177
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Entry
Psyc_1177 CDS
T00256
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
par
Psychrobacter arcticus
Pathway
par03030
DNA replication
par03430
Mismatch repair
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyc_1177 (dnaE)
03430 Mismatch repair
Psyc_1177 (dnaE)
03440 Homologous recombination
Psyc_1177 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
par03032
]
Psyc_1177 (dnaE)
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_1177 (dnaE)
Enzymes [BR:
par01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyc_1177 (dnaE)
DNA replication proteins [BR:
par03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psyc_1177 (dnaE)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psyc_1177 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AAZ19028
UniProt:
Q4FSI0
LinkDB
All DBs
Position
1410102..1413845
Genome browser
AA seq
1247 aa
AA seq
DB search
MAFVHLGIHSEYSITDSIVRIKPLVKAAAADNQRALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMENEDTRLTLLAMDNEGYQNITRIVSLGFTEGRADPVNHGTPVIKRSHILEH
GAGVIVLFTEKSDVGQALVGSMPEKADELITEWQASFDDRLYFAIKRTNRTGEDAFIKAA
IHSGAKHHIPIIAHNDVRFLEQDDFDAHEARVCIAGSYVLADQNRPQTYSDAQYLKTQAQ
MQQLFADIPQVIDNTLRLATRCNVTLTLGINVLPEFPVPEGETTESFFRLESQRGLENRL
DKLFPVDARSDHWSDIRQRYDERLEYELKVILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARAQSKSYFLASKMSKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDAIEVWEMAIKLEGICRNVGKHAGGVLIAPHKITDFSAIYCDDEGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVISAAVENINKRRAKEGKEALVLEDLPLDDAKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATAQGIDEATSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFALTVVNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVESIVEARRREGPFKDLYDFCRRVDIKKVNKRTLEGLINAGCFDDFAATLRPDLPS
DEAYEIRGALMSQLPSAVQAAEQDRQNREIGMMDLFGEMDGVVAAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPIDEYRDELKRYTSGARLDKLADTGYNGSCYFAGLIIDIANFGT
RNVITLDDGTSRLEVSCYAERFNRVKDQLKIDEVVIIKGSIRERDGRLFARLDNAMSMVD
ARLRWLKKISIKVHGSDINLLTCMQPLLKSAQASIIPAPKLSYGNEQDEQSSTTNTDSFG
GYNAVIGGSLYDEDGNDLLALENNMAQDAYSNGVEPSMSNQSYANNALGNTDASIRDNCL
PLGLSIYEEYGIANVGLSEHWRIYPNDDNLQQLKSMISEDNLHFHYG
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtacaccttggcatccacagcgaatattccattaccgattctatcgtgcgt
atcaagcctttggttaaggcagcggcggcggacaatcagcgtgcccttgccttgaccgat
ttatccaacctttatgctaccgtgaagttttaccgtgcttgcttaggtgctggtattaag
cccatcatcggtagtgaagtcatcatggagaatgaagacacgcgtctcactctattagca
atggataacgaaggttatcaaaacattacccgtatcgtgtcgcttggatttaccgaaggt
cgcgctgatcctgtaaaccatggtacgcctgtcattaaacgcagtcatattttagaacat
ggggcaggtgtcattgttttatttactgaaaaatctgatgttggtcaggcgctggtcggc
tctatgccagaaaaagccgatgagctgattacagagtggcaagcatcatttgacgaccgc
ttatattttgcgattaagcgcaccaatcgtactggcgaagatgcctttattaaagcagcg
attcactcaggcgccaaacatcatattcctatcattgcccataatgacgtgcggttttta
gagcaagacgactttgacgcacatgaagcgcgcgtttgtattgcaggctcttatgtactg
gcagaccaaaatcgtcctcagacttattctgatgcccagtacttgaaaacccaagcgcaa
atgcagcagctatttgctgatattccgcaggttattgacaatactttgcgcttagcaacc
cgctgtaatgtgacattaacgctaggtattaacgtcctgccagagtttccagtgcctgag
ggtgagacgactgaatcattttttcgcttagaatcgcagcgcgggcttgaaaatcgttta
gacaaacttttcccagttgacgcgcgcagtgatcattggagtgatatccgccaaagatac
gatgaacgtttagagtatgaactcaaagttatcctctcaatgggtttccccggttacttt
cttatcgttatggactttatccgctgggcaaaagccaatggcgtaccagtaggtcctggt
cgtggttctggggcaggctctctcgttgcttatgcgctcaatattaccgaccttgaccct
attcattatgatttgttatttgagcgctttttaaaccctgagcgtgtgtccatgcccgat
ttcgatattgacttttgtattgaaggtcgcgaccgggtcattgattatgtggcgcaaact
tatggtcgtgaagcggtgtcgcaaatcattacctttggtacgatggcagcaaaagcggtc
gtacgagatgtggcacgtgcgcaaagtaaatcctactttcttgccagtaaaatgtcgaaa
cttattcccaaaacaccgggtatcacactcagtcaagcgcttgagcaagagccacagctc
aaagacttaatatccaatcctgataacatggattatgaagatgccatcgaagtatgggag
atggccattaagcttgaaggcatttgccgcaacgtgggtaaacatgccggcggcgtgttg
attgcgccgcacaaaatcactgattttagcgccatttattgtgatgatgaaggtcatcgt
gtcagccaatttgataaagatgatgtcgaagcggttgggctggtaaaatttgacttcttg
ggtctacgtaacttaacggtcattagtgcggccgttgaaaatattaataagcgtcgtgct
aaagaaggcaaagaagctttggtattagaagacttgccccttgatgacgctaaagcctat
aagctcttgcaagacgccaaaaccactgccgtctttcagctagaaagtatgggcatgaaa
aagtatctggcaaaattgcaaccgaccaatatcgaagacgttatcgccatgtgtgcgctc
tatcgtcccggtccgcttgatgctggtatggtagagatgtatatcgaccgtaaacatggt
cgtgaagaagtgatttatgaccatcccaatcttgaaccgattttagaaaataccaacggc
gttattgtttatcaagaacaggtcatgcaaatttcgcaggtcatggcgggatatagcttg
ggcggcgcggatatgcttcgccgtgcgatgggtaaaaagaaaccggaagaaatggcaaaa
cagcgcgatattttcgtgactggtgcaaccgcgcaaggcattgatgaagcgacatctggc
ggcgtctttgatttgatggaaaaatttgccggttacggttttaaccgctcgcactcagcg
gcttatggcgtgctcgcttatcagaccgcttatctaaaacaatactaccctgctgagttt
atggcagccgtactgacatcagatatgaataacacggataacgtggtgttctttatcaat
gattgccgtgaaaactttgctttaaccgtcgttaatccatcagtaaaccgcagtgaatgg
cactttgtcgctgataccccgaccaatattatttatggtttgggcgcgattaaaggcgtt
ggcgaaggtgctgtcgaatctatcgttgaggcacgccgccgtgaaggcccgtttaaagac
ttatatgacttctgccgccgcgttgatatcaaaaaggtcaacaagcgtacccttgaagga
ctgataaacgctggctgttttgatgactttgctgcaaccttaagacctgacttgccaagc
gatgaagcatatgagattcgcggcgctttaatgagtcagctgcccagtgcggtacaagcc
gctgagcaagaccgtcaaaatcgcgaaatcggcatgatggatttgtttggtgaaatggat
ggtgtcgtcgccgcgcctcctctggtcatgacgccagagctgatttggggtgataagcat
cgtcttaaagctgagaaaaacaccttagggctttatttaaccggacatcctatcgatgaa
tatcgtgacgagctaaaacgttatacctcaggtgctcgtctcgacaaattggctgatact
ggctataacggcagctgttattttgccggtcttatcatcgacatagccaactttggcact
cgtaacgttattaccttagacgatgggacttcacggttagaggtcagctgttatgctgag
cgctttaaccgcgtaaaagaccagctaaaaatcgatgaagtagtcattatcaaaggcagt
attcgtgagcgtgacggccggctgtttgctcgtcttgataatgccatgagcatggttgat
gctcgcctgcgttggcttaaaaaaattagcatcaaagtccatggcagtgatattaatctg
ctgacatgtatgcagccactgctaaaatctgcacaagccagcattattccagcacccaaa
ctttcttatggcaatgagcaggacgagcaaagcagcactactaatactgatagtttcggc
ggttacaatgccgtaataggcggcagcttatatgacgaagatggcaatgatttattggca
ctagagaataatatggcgcaagacgcttattcaaacggtgttgagccaagcatgagtaac
caaagctatgccaataacgctttgggcaacaccgatgcctctattagagataattgcctg
ccgcttggactcagcatttatgaagaatacggcattgccaatgtaggactgtccgagcat
tggcgcatttatccaaatgatgacaatttacagcagctaaaaagtatgattagtgaagat
aatttacactttcactacggctaa
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