Psychrobacter arcticus: Psyc_1244
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Entry
Psyc_1244 CDS
T00256
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
par
Psychrobacter arcticus
Pathway
par04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Psyc_1244 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
par03016
]
Psyc_1244 (trmU)
Enzymes [BR:
par01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Psyc_1244 (trmU)
Transfer RNA biogenesis [BR:
par03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Psyc_1244 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
Asn_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AAZ19094
UniProt:
Q4FSB4
LinkDB
All DBs
Position
1492614..1493840
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AA seq
408 aa
AA seq
DB search
MSAMPNTSSISVSAAFDAHRPLTLTYIDNPSTKHVIVGMSGGVDSSVSAVLLQQAGFVVE
GLFMKNWEEDDGTEYCTAMDDLADAQAVCDKIGIKLHTANFAMEYWDRVFEHFLAEYKAG
RTPNPDILCNKEIKFKAFLDYALTLGADYIATGHYTRRSVNYKNNDGIEVAQLLRGLDNN
KDQSYFLHAVGGDKLAKTLFPVGELEKPVVRQIAEEHDLITANKKDSTGICFIGERRFKD
FLQQYLPAQKGDIVTDDGINIGTHDGLMYYTLGQRGGIGIGGVKDRPEEPWFVLAKDLDN
NRLIVGQGHEHPMMLSNELHAYKLDWTDGLPPTDIFSLEGLRCMAKSRYRQPDQACRVFA
VNADGSEVRVIFDEPQRAVTPGQSAVFYIEEVCLGGGVIASIDAPCGF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccatgccaaacacctcaagcatatccgtttctgctgcttttgacgcccatcgc
cctctaacgcttacctatattgacaatcctagtactaaacatgtaattgtcgggatgtca
ggtggtgtcgactcttctgtctctgccgtattgcttcagcaggcaggctttgtagttgaa
gggctgtttatgaaaaattgggaagaagacgacggtactgagtactgtacggctatggac
gatttggcagacgcgcaagcggtgtgcgacaaaattggcataaaattgcataccgcaaac
tttgccatggaatactgggatcgcgtttttgagcattttttagcagaatacaaagccgga
cgcacgcccaatccagatatcctatgcaataaagaaattaagttcaaagcatttttggat
tacgccttaacccttggcgctgattatatcgctactggtcactatacccgccgcagtgtg
aactataagaataatgacggtattgaggtagcgcaattactacgtgggctcgataacaat
aaagaccaaagctactttttacatgcggttggcggtgacaagcttgccaaaaccctgttc
ccagttggtgagcttgaaaaaccagtcgttcgtcaaatcgctgaagaacatgacttgatt
actgccaataaaaaagactcgactggcatctgctttattggtgagcgccgttttaaagac
tttttacagcagtacttgccggcacaaaaaggcgatatcgtcactgacgatggcattaat
attggtacgcatgatggtctgatgtactatacattaggtcagcgcggtggtatcggtatt
ggcggtgtgaaagatcgtcccgaagaaccatggtttgtattggcaaaagatttagataac
aatcgtcttatcgtcggtcaaggtcatgagcaccccatgatgctgagcaatgagctgcat
gcttataagctagattggacagatggtctgccacctacagatatttttagcttagagggc
ttacgctgtatggcaaaatctcgctatcgtcagcccgaccaagcctgccgtgtatttgcg
gtcaatgctgacggcagtgaggttcgtgtgatatttgatgaaccacaacgcgctgttact
ccgggtcagtcagcggtattttatattgaggaggtttgcttaggcggcggcgtgattgcg
tcaattgatgcgccttgcgggttttaa
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