Paraburkholderia sp. SOS3: BTO02_02685
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Entry
BTO02_02685 CDS
T04966
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTO02_02685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_02685
Enzymes [BR:
para01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BTO02_02685
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BTO02_02685
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BTO02_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
APR34495
UniProt:
A0A1L6HT83
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All DBs
Position
1:583985..584815
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPYVAGRRVERVEVRTAALRWPIPADLPRMLRGRLVKHVERRGKYL
LFEIDEGWFIVHLGMTGTLRVLRNVPHPPAAAKHDHVDWVFDDFILRFRDPRRFGAVLWH
PRSDGDVLEHPLLAGLGIEPFAPAFTGALMHRKTRGRTVSVKQALLAGEIVVGVGNIYAS
ESLFRAGIRPTTPAGRVSLVRYELLADAVRVTLAAAIEKGGSTLRDFVGSDGESGYFQLD
YFVYDRAGLPCRVCETPIRQIVQGQRSTYYCPTCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcttccagaagtcgaagtcacccgccgtgggatcgagccttatgtggccggg
cgccgcgtcgaacgggtggaggtgcgcacagcagcgctgcgctggccgattccggctgat
ctgccgcgcatgctgcgcggccggctcgtgaagcatgtcgagcgacgcggcaagtatctg
ctgttcgagatcgacgagggctggttcatcgttcacctcggcatgacgggcacgctgcgc
gtgttgcgcaacgtgccgcatccgccggcggctgcgaagcacgaccatgtcgactgggtg
ttcgacgacttcatcttgcgctttcgcgacccgcgccgtttcggcgccgtgctctggcat
ccgcggtcggacggcgacgtgctcgaacacccgctgctcgccggcctcggcatcgagccg
tttgcgccggccttcacgggcgcgctcatgcatcgtaagacgcgtggaaggaccgtatcg
gtgaagcaggcgctgctcgccggcgagatcgtggtcggcgtgggcaacatttacgcttcc
gaaagcttgtttcgagcaggcatccggccgaccacgcccgcgggccgcgtgtcgctcgtg
cgttacgaactgcttgcagatgcggtgcgcgtgacgcttgccgccgcgatcgaaaaaggc
ggcagcacgttgcgcgacttcgtcggcagcgacggtgagagcggctacttccaactcgat
tatttcgtctatgatcgcgcggggctgccgtgccgggtatgtgaaacgccgatcagacag
atcgtgcaggggcagcgttccacttactattgtccgacctgtcagcgctga
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