Paraburkholderia sp. SOS3: BTO02_08040
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Entry
BTO02_08040 CDS
T04966
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
para
Paraburkholderia sp. SOS3
Brite
KEGG Orthology (KO) [BR:
para00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_08040
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BTO02_08040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
APR35382
LinkDB
All DBs
Position
1:complement(1746408..1746854)
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AA seq
148 aa
AA seq
DB search
MVDIVDAATRSRMMSGIRGRNTKPEILIRSLLHRRGFRFRLDARDLPGRPDIVLPRYHAV
VFVHGCFWHGHDCHLFKWPQTRVEFWREKIGRNRSNDAKVTAALRERGWRVATVWECALR
GANRDLDGVLRRLVDWLQSDAATLDERA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatatcgtcgatgcggcgacgcgcagccggatgatgtccggcatacgcggccgc
aacacgaaacccgagattctgatccgcagcctcctgcaccgccgcggctttcgctttcgc
ctcgatgcgcgcgacctgccgggccggcccgacatcgtgttgccgcgctatcacgccgtt
gtattcgtacatggatgtttctggcacggccacgactgccatctgttcaaatggccgcaa
acgcgcgtcgagttctggcgcgagaagatcggccgcaaccgcagtaacgacgcgaaggtc
acggccgcactgcgcgagcgcggctggcgcgtcgcaacggtctgggaatgcgcattgcgc
ggtgcgaaccgggatctcgacggcgtgttgcgacgcctcgtcgactggctgcaaagcgac
gcggcaacgctcgacgaacgcgcctga
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