Paraburkholderia sp. SOS3: BTO02_14395
Help
Entry
BTO02_14395 CDS
T04966
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTO02_14395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
para03019
]
BTO02_14395
03016 Transfer RNA biogenesis [BR:
para03016
]
BTO02_14395
Enzymes [BR:
para01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTO02_14395
Messenger RNA biogenesis [BR:
para03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTO02_14395
Transfer RNA biogenesis [BR:
para03016
]
Prokaryotic type
tRNA degradation factors
BTO02_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
Methyltransf_FA
KH-I_KHDC4-BBP
KH_KhpA-B
UPF0181
S1_2
Motif
Other DBs
NCBI-ProteinID:
APR36407
LinkDB
All DBs
Position
1:complement(3225088..3227229)
Genome browser
AA seq
713 aa
AA seq
DB search
MSMFNKIVKEFKWGQHTVRLETGEIARQASGAVLVDVEDTVVLATVVGAKTAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVM
SINPDVPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRSQIKESRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAPK
NEALIARVNEIAYNELLSAYQTRDKQARSAKLKEVYAATSAKLEAEALATGGVAADKATV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSAEGMAEAKKRIENITMEVEVGQIYEGTVLKLLDFGAIVNILPGKDGLLHISE
IANERIKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNDGAATQPESTPQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtttaacaagatcgtcaaagaatttaagtgggggcagcatacggttcgcctc
gagacgggcgaaatcgcccgccaggcgagcggtgccgtgctcgttgacgtcgaagatacg
gtcgtgctcgccaccgtcgtcggtgcgaagaccgccaagccgggccaggatttctttccg
ctgacggtcgactacatcgaaaagacctactcggcaggcaagattccgggcggtttcttc
cgccgcgaaggccgtccgtcggaaggcgaaacgctgatctcgcgcctcatcgatcgtccg
ctgcgtccgcttttcccggaaggcttctataacgaagtgcaggtcgtcatccacgtgatg
tcgatcaacccggacgtgccggccgacatccccgcgctgatcggcgcatcggctgcgctc
gcggtgtcgggcctgccgttcaacggcccggtcggcgccgcgcgtgtcgcgtacatcaac
aacgaatacgtgctgaacccgacgcgctcgcagatcaaggaatcgcgtctggacctcgtc
gtcgccggtaccgagcgtgccgtgctgatggtcgaatccgaagcggaccaactgcccgaa
gacgtgatgctcggcgcggtcgtgttcggccacgagcagatgcaaacggcgatcgacgcg
atccacgaactcgtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
aacgaagcgctgatcgcgcgcgtcaacgaaatcgcttacaacgaactgctttccgcttat
caaacgcgtgacaagcaggcgcgttcggcgaagctgaaggaagtctacgcagcgacgtcg
gcgaagctcgaagcagaagcgctcgcaacgggcggcgttgcggccgataaggcgacggtc
ggcaatgtgctgttcgatatcgaagcgaagatcgtccgttcgcaaatcctgaacggcgag
ccgcgcatcgacggccgcgatacgcgcaccgtgcgtccgatcgagatccgcacgggcgtg
ctgccgcgcacgcacggttcggcgctcttcacgcgcggcgaaacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggcgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gaccgcttcatgctccactacaacatgccgccgttcgcgaccggcgaaacgggccgcgtc
gggtcgccgaagcgccgcgaaatcggccacgggcgtctggccaagcgcgcgctcgtcgcg
tgcctgccgagcgccgacgaattcggctattcgattcgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcgtcggtgtgcggcggctgtctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgccggcatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgttgaccgacatcctcggcgacgaagatcatctcggcgacatggacttc
aaggtggccggtaccgccgacggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcccaggcgaaggaaggccgcatgcatatc
cttggcaagatgacctcggccgtgtcgggcgcgaacacgcaactgtccgagttcgccccg
cgcatgatcacgatcaagatcaatccggaaaagattcgcgacgtgatcggcaagggcggc
tcggtgatccgcgcgctgaccgaagaaacgggcacgacgatcgacatctccgacgacggc
gtcgtgacgatcgcgagcacgagcgcggaaggcatggccgaagcgaagaaacgcatcgaa
aacatcacgatggaagtcgaagtcggccagatctacgaaggcacggtgctcaagctgctc
gacttcggcgcgatcgtgaatatcctgccgggcaaggacggtctgctgcatatctccgag
atcgcgaacgagcgcatcaaggacatcaacgactatctgaaggaaggccagcaggtgaag
gtcaaggtcatccagacggatgaaaagggccgcgtgcggttgtcggcaaaggcgctgctg
aacgacggcgccgcgacgcaacccgaatcgaccccgcagtaa
DBGET
integrated database retrieval system
