Paraburkholderia sp. SOS3: BTO02_18050
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Entry
BTO02_18050 CDS
T04966
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
para
Paraburkholderia sp. SOS3
Brite
KEGG Orthology (KO) [BR:
para00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
para03016
]
BTO02_18050
Enzymes [BR:
para01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BTO02_18050
Transfer RNA biogenesis [BR:
para03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BTO02_18050
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
APR36985
UniProt:
A0A1L6I0E1
LinkDB
All DBs
Position
1:complement(4065370..4067553)
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AA seq
727 aa
AA seq
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MNVFFEESGSFKAGSVLSKQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMEQADAA
AQQIDLDFLWECAPEDEFPFATLGAEYFGDAFGPIERAALVLRMHGSPVYFRRKGRGQYQ
RAPQEQLQMALASLERKRQQALVQSGYEDELKEGRLPEAFAGKALALLTKPDKNSIEYKA
LEAAAAHRGVSPARLMLDCGGIPSARALHEARFLSEFFPHGTAFPPVTPGPLPDDLPEAE
VEAFSIDDVTTTEIDDAFSVEHLADGRVRIGVHIAAPALGIARGDAVDAIARARLSTVYM
PGDKITMLPDGVVDVFTLAEGGMRPALSLYSIVNRETQEIVASETRAELVFVKANLRHNT
LDEVVTEEALAAGTGDYPHKDDIAVLWPFAQALFEKRQVMRASFGLRREVQRNTDFNFYV
EGEHVTITPRRRGSPLDLIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWIRQEDRKQVVASVVKGDLVRLEEVPLLLHVPGL
GVHARGTRVLLEVMTIDELTIEASVRLLHVLDAPTVTSGAEAEEAGEGDENDEGEGDEEI
IDAADESAQSEAEAQAEADVDDAASSSEAGDVAADDGAAQSGNEHEVDASNADAAGSAPH
RETEPGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttctttgaggaatcgggcagtttcaaggcaggcagcgtgttgtcgaagcag
ggcgacgcgttccaggtcgagttgccgggcggccggcgcgcaaaagtgcgcgcaaaagac
gtgctgatcgaattcgacaagccggcggccggcgaactgatggagcaggccgacgcggcc
gcgcagcagatcgatctcgacttcctgtgggaatgcgcgccggaggacgaatttccgttc
gcgacgctcggcgccgaatacttcggcgacgcgttcgggccgatcgagcgcgcggcgctc
gtgctgcgcatgcacggctcgccggtctatttccggcgcaagggccgcggccagtaccag
cgcgcgccgcaggagcaattgcagatggcgcttgcgtcgctcgaacgcaaacgtcagcag
gcgctcgtgcaatcgggctacgaagacgaactgaaagagggccgtctgcccgaggcgttc
gccggcaaggcgcttgcgttgctcacgaagccggacaagaactcgatcgagtacaaggcg
ctcgaagcggcggccgcgcatcgcggcgtgtcgccggcgcgtctgatgctcgactgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgtttcctgtccgaattcttcccgcac
ggcacggcctttcccccggtcacgccgggcccgctgcccgacgacctgcccgaagccgag
gtcgaggcgttctcgatcgacgacgtgacgacgaccgaaatcgacgatgcgttttcggtc
gagcatctcgccgatggccgcgtgcggatcggcgtgcatatcgccgcgccggcgctcggc
attgcgcgcggcgacgcggtcgatgcaatcgcgcgcgcgcggctgtcgacggtctatatg
cccggcgacaagatcacgatgctgcccgatggcgtggtcgacgtgtttacgctcgccgag
ggcggcatgcggccggcattgtcgctctacagcatcgtgaaccgcgagacacaggagatc
gtcgcgagcgaaacgcgcgccgaactcgtgttcgtgaaggccaacctgcggcataacacg
cttgacgaagtcgtcaccgaagaggccctcgccgcgggcacgggcgactatccgcacaag
gacgacatcgcggtgctgtggccgttcgcgcaggcgctgttcgaaaagcgccaggtgatg
cgcgcgagcttcggcctcaggcgcgaggtgcagcgcaataccgatttcaacttttacgtg
gaaggcgagcatgtgacgattacgccgcgccggcgcggctcgccgctcgatctgatcgtc
gcggagctcgcgattctcgcgaactcgacgtggggcgccttcctgcacgatcacggcgtg
ccgggcatctaccggtcgcagcgtgcattcggcgcgccgaccgggccgaaacgcacgcgc
atgcaaacgacggccgcgccgcacgaagggctcggtgtcgcgcaatacgcgtggagcacg
tcgccgctgcggcgctatgtcgacctcgtcaatcagtggcagttgatcgcgtgcgtgcag
catggcgtgaccgcgaagctcgccgcgccgttcaagccgaaggacgcggacctgttcgcc
gtcgtgcagggcttcgacgatacgtacaccgcctacgccgatcatcagcgccggatggag
tatttctggtgcttgcgatggatcaggcaggaagaccgcaagcaggttgtcgcgtcggtc
gtgaagggcgatctcgtgcgactcgaagaggtaccgctgctgctgcacgtgccggggctc
ggcgtgcatgcgcgcggcacgcgcgtgctgctcgaggtgatgacgatcgacgagctgacg
atcgaagcgtcggtgcgtctgctgcacgtgctcgatgcgccgaccgtgacgagcggtgcc
gaagccgaagaagcgggcgaaggcgacgagaacgacgaaggcgagggcgacgaggaaatc
atcgacgccgccgatgagtccgcgcaaagcgaagccgaggcgcaagcggaagcggacgtc
gatgacgcggcttcttcgtccgaggccggcgatgttgcggcggacgacggcgcggcgcaa
agcggcaacgaacacgaagtcgacgcatcgaatgccgacgccgcaggctccgctccacat
cgcgagacggagccgggccgatga
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