Paraburkholderia sp. SOS3: BTO02_18955
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Entry
BTO02_18955 CDS
T04966
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para00300
Lysine biosynthesis
para00470
D-Amino acid metabolism
para01100
Metabolic pathways
para01110
Biosynthesis of secondary metabolites
para01120
Microbial metabolism in diverse environments
para01230
Biosynthesis of amino acids
Module
para_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
para00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BTO02_18955
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BTO02_18955
Enzymes [BR:
para01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BTO02_18955
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
APR37133
UniProt:
A0A1L6I094
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All DBs
Position
1:4256527..4257789
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AA seq
420 aa
AA seq
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MTRSAFAYVDGVLHAEGVSAVSLAERFGTPLYVYSRAALTAAWQAYAGACAGRRASVHVA
VKANSNLAVLNVFARMNAGFDIVSGGELARVLAAGGKAENTVFSGVGKTASEMREALAAG
VKCFNVESISELDRLNEVAGAMGKRAPVSLRVNPDVDAKTHPYISTGLKANKFGVAFDDA
RETYRAAAAMRHLEVVGIDCHIGSQITEVAPYLDAIDRLLELVEQIEADGSTIRHIDVGG
GLGITYDDETPPDIGVFVSTVLDRIDARGHGQREVYFEPGRSLVGNAGILLTQVEFLKPG
VEKNFVIVDAAMNDLARPAMYEAYHAIEPVVVRDAPKHVYDVVGPVCESGDWLGRERELA
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGDKVHVVRAREEVRQLFAGESLLPD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatcagccttcgcctatgtcgacggcgtgctgcacgccgaaggcgtgtcggcc
gtgtcgcttgccgagcggttcggcacaccgctctatgtctactcgcgcgcggcgctgacc
gccgcatggcaagcgtatgcaggcgcatgcgcgggccgccgggcaagcgtgcatgtcgcc
gtgaaagcgaacagcaatctcgcggtgctcaacgtgttcgcgcgcatgaacgcgggcttc
gacatcgtgtccgggggcgagctcgcgcgtgtgctggctgccggcggcaaggccgaaaat
accgtgttttcgggcgttggaaagaccgcttcggaaatgcgcgaggcactcgcggcgggc
gtgaagtgtttcaacgtcgagtcgatttccgaactcgatcgcctcaacgaagtggcgggc
gcgatgggcaagcgggcgccggtgtcgctgcgcgtgaatcccgacgtcgacgcgaaaacg
catccgtacatctcgacgggtctgaaggcgaacaagttcggcgtcgcgttcgacgacgcg
cgcgagacctatcgtgcggccgcggcgatgcggcacctcgaggtggtcggcatcgattgc
catatcggttcgcagatcacggaagtcgcgccgtatctcgatgcgatcgaccgtctgctc
gagcttgtcgaacagatcgaagccgacggttcgacgattcgccatatcgacgtcggcggc
ggcctcggcatcacctacgacgatgaaacaccgcccgatatcggcgtgttcgtcagcacc
gtgctcgatcgcatcgacgcacgcgggcacgggcaacgcgaggtgtatttcgagccgggg
cgttcgcttgtcggcaacgccggcattctgttgacccaggtcgaattcctcaagcccggc
gtcgaaaagaactttgtcatcgtcgacgccgcgatgaacgacctcgcgcgccccgcgatg
tacgaggcttatcacgcgatcgaaccggtcgtcgtacgtgatgcgcccaagcatgtttac
gacgtcgtgggtccggtctgcgaaagcggcgactggctcggccgcgaacgcgagctggcc
gtggaacccggcgatctgctcgcgatccgctcggcaggcgcgtacggcttcgtaatgagc
tcgaactacaacacgcgcccgcgcgccgctgaagtgatggtggacggcgacaaggtgcac
gtcgttcgcgcgcgcgaagaggtcaggcaattgttcgcgggcgaatcgctgctgccggac
taa
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