Paraburkholderia sp. SOS3: BTO02_19010
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Entry
BTO02_19010 CDS
T04966
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTO02_19010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
para03021
]
BTO02_19010
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_19010
Enzymes [BR:
para01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTO02_19010
Transcription machinery [BR:
para03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTO02_19010
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTO02_19010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
APR37142
LinkDB
All DBs
Position
1:complement(4269815..4270792)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagattatcgccgttgaatcgttgggcgaaagccac
gcgaaggtggtcatggagccgttcgaacgcggctatggccacaccttgggtaacgcgctt
cggcgcgtattgctgtcgtcgatgatcggctatgcgccgaccgaagtgacgatcgcaggc
gtcgtgcatgagtattcgacgctggacggtgtgcaggaggacgtggtcaacctgttgctg
aacctcaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtcgtcaccgcgggcgatatcgagctcgcgcacgactgtgaagtg
atcaaccctgatcacgtgatcgcgcatctgtcgaagggcggcaagctcgacgttcagatc
aaggttgagaagggccgcggttatgtgccgggcaacgtgcgtcgctacggcgaagagtcg
gcgaagatcatcggccgtatcgtgctcgacgcatcgttctcgccggttcgccgggtgagc
tacgcagtcgaaagcgcgcgcgtcgagcagcgtaccgatctcgacaagctcgtgatgaac
atcgaaaccaacggtgtgatttcgccggaggaagcgattcgtcagtcggcgcgtattctg
gtcgaccagctgtcggtgtttgccgcactggaaggtacggaagccgcggcggaagcgccg
tcgcgcgcaccgcagatcgatccgatcctgctgcgtccggtcgatgatctcgagctcacc
gttcgttcggcaaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcaccgaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctgaacgagatc
aaggaagtgctcgcttcgcgcggtttgacgctcggtatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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